| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1887 |
|---|
| Symbol | |
|---|
| ID | 6877872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1875379 |
|---|
| End bp | 1875999 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642789757 |
|---|
| Product | potassium-transporting ATPase, C subunit |
|---|
| Protein accession | YP_002220315 |
|---|
| Protein GI | 198283994 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2156] K+-transporting ATPase, c chain |
|---|
| TIGRFAM ID | [TIGR00681] K+-transporting ATPase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.682911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.201201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG ACATCAAAAC CGCGCTGTTG CTATTCCTGG TTCTGGCCGT GATGACCGGC
CTGATCTATC CCTTGGCCAT GACGGGTATC GGTCAGATCG TGTTTCCCCA TCAGGCCAAC
GGCTCACTCA TTCATCAGCA TGGACGGGTC GTGGGTTCCA GCCTCATTGG TCAGTATTTC
CGCGAACCGC AGTATTTCTG GAGCCGCCCT TCGGCGACTT CACCGGTACC ATACAACGGG
GCGGGATCCA GCGCCTCCAA TCTGGGCCCG AACAATCCTG CTCTGGCACA GCACGTGGCG
GCGCGGATCA AGGCCCTCAA GGCCGCCGAT CACGCGGGAA AAGGGCCGGT CCCGGTGGAT
CTCGTGACGT CTTCCGCGAG TGGTCTGGAT CCTGACATCA GTATTGCGGC GGCGCTCTAT
CAGGTCCCAC GCGTTGCGCG GACTGGTGGT ATCAGTATCG TAACATTGCA CCGGTTGATC
AGGGAGAACA CGACAGAACC CCTGCTGGGT TTCATCGGAG AACCAGTGGT CAATGTAGTG
AAGCTCAATC TCGCGCTGCA TGCGCGATAT GTCACCGCAC CTGTGGCAAC GAAATCCCTC
ACGAAAGGAC CACCATCATG A
|
|---|
| Protein sequence | MIKDIKTALL LFLVLAVMTG LIYPLAMTGI GQIVFPHQAN GSLIHQHGRV VGSSLIGQYF
REPQYFWSRP SATSPVPYNG AGSSASNLGP NNPALAQHVA ARIKALKAAD HAGKGPVPVD
LVTSSASGLD PDISIAAALY QVPRVARTGG ISIVTLHRLI RENTTEPLLG FIGEPVVNVV
KLNLALHARY VTAPVATKSL TKGPPS
|
|---|
| |