Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1883 |
Symbol | |
ID | 6877868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1867593 |
End bp | 1868336 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642789753 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002220311 |
Protein GI | 198283990 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0448117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.830698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAACA TACACGAAGG CGATCTGGAT ATCCTGTTGG TGGAGGATGA CCCGAGTATT GGCGGGTTTC TGCAGGCGGC GATGGACCGC GAACCAGGAT ATCGCTTGTA CTGGGAAACC ACGCTGAAAG ATGCCTGGAG GGCTTGGGAG AAACGACAAA TCCAGGAAGG TCGGCCATTC GCTTTGGTTC TGCTGGACCT TGGTTTACCG GATGGGGATG GGCAGGGATT GATCCGTCGT CTACGCGACC ACGGAGGGGA ACAGGCATTG ATCATCGTCA TCTCTGCGCG TGGAGGCGAG GCTGACAAGG TACAGGCCCT CGATAGCGGC GCCGACGATT ATCTGACCAA GCCGTTTACC ATTGGCGAGC TGCTCGCGCG CCTGCGCGCG CATTTGCGGC GACGACCAGT AGGTTCATCC GCCGAATCTT CCCATTGGGT CATTGGCGTC TTGGAGCTGG ATGATCTCAC CCATACCCTT CGCAAGGGCG GGGTGCCTAT TCCGATGACG CCCAAGGAAT ATCAACTGTT CCACCTTTTT GTGATGAATC AGGGGCGGAT ATTGTCGTAT CGACGAATTC TCGGCGCAGT GTGGGGAGAG CACAGTAGCG ATCAGGCCCA CTATGTAAGG TTATATATCA AACGACTGCG GGAGAAGATT GAGGACGATC CCGGAATGCC ACAATATCTG GTAACCGAAA AAGGGGTTGG GTATCGATTT GGCAATCCGG AGGTGTCAAA ATGA
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Protein sequence | MTNIHEGDLD ILLVEDDPSI GGFLQAAMDR EPGYRLYWET TLKDAWRAWE KRQIQEGRPF ALVLLDLGLP DGDGQGLIRR LRDHGGEQAL IIVISARGGE ADKVQALDSG ADDYLTKPFT IGELLARLRA HLRRRPVGSS AESSHWVIGV LELDDLTHTL RKGGVPIPMT PKEYQLFHLF VMNQGRILSY RRILGAVWGE HSSDQAHYVR LYIKRLREKI EDDPGMPQYL VTEKGVGYRF GNPEVSK
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