| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1872 |
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| Symbol | |
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| ID | 6877857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1852164 |
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| End bp | 1852847 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642789742 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002220300 |
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| Protein GI | 198283979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.117122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGC CCCCTGATGA TTGCCGACTG ATCATTTTCG ATTGGGACGG CACCCTCATG
GACAGCATTT CTACCATCTG CGGCTGTCTG GCCCATGCTT TTGGCTATGC AGGGCTGGCG
GATCGCGGAA CGCAGCAGTA CCGGGAAATC ATCGGATTGG GACTGGAAGA CGCCTTGGCG
GCTCTCGCCC CCGATGCGGA TAGGTCTACC CGGGAACGGA TTCTGGCGGG TTACCGGGAG
TGCTTTTTCG GCACGCCGGT CCGTGAAATG CCCCTCTTTC CGGGGGTGGA AGACACGGTG
GTGCAACTCG CCGATGCTGG CTATGAGATC GCCGTGGCCA CCGGCAAAGC CCGCCGCGGC
CTGGATCGGG TGCTGGGCGA GCATCCCCGA CTCGCCGCTT GCATCAGCGC CAGTCGCTGT
GCCGATGAAA GCCGCTCCAA ACCAGACCCC CTGATGCTCC GCGAACTGCT ACGGCACTAC
GATCTGCCCC CAGCGGCGGC CATCATGGTG GGCGACACCG TGCACGACAT GGAAATGGCC
GTGGCCGCCG GGGTCTTGCC GGTGGGGGTG CTCTGCGGCG TACACGGCGC GGAACGCCTG
GATGCCAGCG GTGCCGCGAT GTGTTTTGCC GACCCCACCG CCTTGCCTGG GTGGCTCATT
CGCAAACGCC CCAGGTTTGA ATAG
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| Protein sequence | MILPPDDCRL IIFDWDGTLM DSISTICGCL AHAFGYAGLA DRGTQQYREI IGLGLEDALA
ALAPDADRST RERILAGYRE CFFGTPVREM PLFPGVEDTV VQLADAGYEI AVATGKARRG
LDRVLGEHPR LAACISASRC ADESRSKPDP LMLRELLRHY DLPPAAAIMV GDTVHDMEMA
VAAGVLPVGV LCGVHGAERL DASGAAMCFA DPTALPGWLI RKRPRFE
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