Gene Lferr_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1768 
Symbol 
ID6877750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1746716 
End bp1747267 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID642789636 
Producthypothetical protein 
Protein accessionYP_002220196 
Protein GI198283875 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.996707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAA AAATGACAAT GGCGGCCATT TTAGGGCTTA GCCTGGCGGG GCCAACGATG 
GCTATGGCGG CGGAGGCCCC CTCTGGGGCT ACGGGAAGTA CAGCCGGAGC GCCGGTTGCG
CCCCCAGCTT TCATGTCCCC GGCCTGGGCG CAGGATCTAT GCACCGCGTG GAACAACAGC
CCGACATTGA CCGAAAAACT GGCCGGTTCC TGGGTCAAAA ACAACGGCGG TAAAGGCTAC
AAAGTGATGG AAGTCTCCGA CTCCGACATG AAAACCACCC CACCCGTGCA ACTAGAAATC
GCCCTCAAAG GGGGCAAAGC GGTATGCAGC TATGGCGGCG CCATCAAAGT CAGTAAGCTT
AATTATAATT ATGACTATAA AATGTGGGCG ACCACCCATG ATTGGCATCA CATGGGGTCC
CCGCTGACCG CCATGATGTT CGGGCGCCTG AACTTTAAGG GGCCGAAGAT GGAGGCCATG
GAAAACATGG GTCCCTTCGC TGCTTTCCTG AAACTCGTCA AGGACGTGCC CGCAACGGTT
CCCGCTTCCT GA
 
Protein sequence
MFRKMTMAAI LGLSLAGPTM AMAAEAPSGA TGSTAGAPVA PPAFMSPAWA QDLCTAWNNS 
PTLTEKLAGS WVKNNGGKGY KVMEVSDSDM KTTPPVQLEI ALKGGKAVCS YGGAIKVSKL
NYNYDYKMWA TTHDWHHMGS PLTAMMFGRL NFKGPKMEAM ENMGPFAAFL KLVKDVPATV
PAS