Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1768 |
Symbol | |
ID | 6877750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1746716 |
End bp | 1747267 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642789636 |
Product | hypothetical protein |
Protein accession | YP_002220196 |
Protein GI | 198283875 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.996707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGAA AAATGACAAT GGCGGCCATT TTAGGGCTTA GCCTGGCGGG GCCAACGATG GCTATGGCGG CGGAGGCCCC CTCTGGGGCT ACGGGAAGTA CAGCCGGAGC GCCGGTTGCG CCCCCAGCTT TCATGTCCCC GGCCTGGGCG CAGGATCTAT GCACCGCGTG GAACAACAGC CCGACATTGA CCGAAAAACT GGCCGGTTCC TGGGTCAAAA ACAACGGCGG TAAAGGCTAC AAAGTGATGG AAGTCTCCGA CTCCGACATG AAAACCACCC CACCCGTGCA ACTAGAAATC GCCCTCAAAG GGGGCAAAGC GGTATGCAGC TATGGCGGCG CCATCAAAGT CAGTAAGCTT AATTATAATT ATGACTATAA AATGTGGGCG ACCACCCATG ATTGGCATCA CATGGGGTCC CCGCTGACCG CCATGATGTT CGGGCGCCTG AACTTTAAGG GGCCGAAGAT GGAGGCCATG GAAAACATGG GTCCCTTCGC TGCTTTCCTG AAACTCGTCA AGGACGTGCC CGCAACGGTT CCCGCTTCCT GA
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Protein sequence | MFRKMTMAAI LGLSLAGPTM AMAAEAPSGA TGSTAGAPVA PPAFMSPAWA QDLCTAWNNS PTLTEKLAGS WVKNNGGKGY KVMEVSDSDM KTTPPVQLEI ALKGGKAVCS YGGAIKVSKL NYNYDYKMWA TTHDWHHMGS PLTAMMFGRL NFKGPKMEAM ENMGPFAAFL KLVKDVPATV PAS
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