Gene Lferr_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1746 
Symbol 
ID6877728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1722892 
End bp1723833 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content53% 
IMG OID642789615 
Productpeptidase M48 Ste24p 
Protein accessionYP_002220175 
Protein GI198283854 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0403814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTT GGCGTTGGCA CCATCTTGTC AATTGGCTTG AATCGACAGG CATCATCAGC 
GCGATGTTGT TGCTGATGAT GTGGATCGGT TGGCTCCTGG GTGGAGTAGA TACGCTTTAC
GTGATGTTGG GTGCGGGCAT TCTGTTTATT TTATTTGCGC CCCGGCTGAT GCCACAATTA
CTCATTCGTA GAATGGGAGC GGAAGTCATT ACACCCGGGC AATCGCCGCT GCTCTTCGAT
ATGGTGCAAA GATTGTCCGA ACGCTCCGGG CTGGAACATT TTCCGACCTT GTATCACCTG
CCCACCCCTG CCCTGAATGC ATTTTCCACC GGACTGGATG CACATGTGTC CTTGGTGATT
TCCGATGGCC TGCTGCGCAC ACTTGATGGG CGTGAACTGG CTGCTGTGTT GGCACATGAG
ATCTCCCATA TCCGCCACAA GGATATCTGG GTCATGATTG TTGCGGATCT CTTCAGCCAG
ATGACATGGA CGTTCTGTTT GCTGGGCCAG GTTTTGATCC TGATCAATTT ACCCTTATGG
ATCATGCATA AGTACACCAT GCCATGGGGA CTGATTTTTT TGCTGATGGT CGCACCCTCG
GTAAGTATGT CGTTGCAATT GGTTCTTTCT CGCACACGTG AGTTTGAGGC GGATCGTGGT
GCCATGGAAC TCACCCATGA CCCCCAGGGT CTGGCCAGCG CACTGCAAAA GATGGAAGAT
GCCCAGGAAC GGGAAATGAA AATACTGTTC CCCAAACTGG GGAGAGTAGC CGTTCCCTCG
TGGTTACGCA CCCATCCGAG GACAGAAGAA CGCATTCGCC GACTTTTCGC CACAGCGCGT
CCCTTGAGCC ATCCGGAAAT ATGGGCATGG GACCACGGTG TAAGTCTGCC CATAGCCAAA
GACCTGCCAC GCTGGCGTCA CCTGTCGGGT TTTCGCTGGT AG
 
Protein sequence
MLRWRWHHLV NWLESTGIIS AMLLLMMWIG WLLGGVDTLY VMLGAGILFI LFAPRLMPQL 
LIRRMGAEVI TPGQSPLLFD MVQRLSERSG LEHFPTLYHL PTPALNAFST GLDAHVSLVI
SDGLLRTLDG RELAAVLAHE ISHIRHKDIW VMIVADLFSQ MTWTFCLLGQ VLILINLPLW
IMHKYTMPWG LIFLLMVAPS VSMSLQLVLS RTREFEADRG AMELTHDPQG LASALQKMED
AQEREMKILF PKLGRVAVPS WLRTHPRTEE RIRRLFATAR PLSHPEIWAW DHGVSLPIAK
DLPRWRHLSG FRW