Gene Lferr_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1718 
SymbolqueA 
ID6877700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1690665 
End bp1691702 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID642789587 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_002220147 
Protein GI198283826 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.644155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAA AAGATTTTCA TTATGAACTG CCCGATGCGT TGATTGCTCA GGCACCTCTC 
CCCGAACGCA GCGCCGCACG CATGCTCATC GTCGATGGCC ATCAAGGCAC CTGGGAAGAT
GCGTGGGTGC GCGATCTGCC CGGCGTGCTT CGGCCCGGCG ACCTGCTGGT GCTCAACGAT
ACCCGCGTGC TTCCCGCGCG TCTGCAGGCC CGCAAGACGA CGGGCGGGGC GGTGGAATTG
CTGCTCGACC GGCTGCTCGA TGCACGAGAT GGCTGGTTTC TGGCGAAATC CTCCAAGGCG
TTGCGGCCAG GTATGTCCAT TCATTTACCG GGCGGCGCCG TTGCCACGGT AGAGGAAAAG
GACGGTATGG ATGTCCGGCT GAGCCTCCCT GCGGATGTTG CGTGGTTACC CATACTCGAA
GCCGGAGGCA GCATGCCTTT GCCGCCCTAT ATCCGGCGGG CGGCGGAGGC CAGTGATCGG
GAGCGGTATC AGACGGTCTA TGCGGCCCGT CCCGGTGCGG TGGCCGCGCC CACTGCGGGG
TTGCATTTCG ATACGGAACT GCTGGACGCC CTGGCGGCGC GCGGCGTCGA GCGGACCTTC
GTGACTTTGC ATGTGGGTGC GGGAACATTT CTCCCGGTGC GCAGCGAAGA TATTACCGAG
CACCCCATGC ACGCCGAGAC CATGGAGGTC AGTGCGACGA CGGTGGCGGC CGTTGCCGCC
GCCAGGGCGC GGGGCGGGCG GGTGATCGCC GTGGGCACCA CCGCCTGCCG GGCGCTGGAG
ACTGCGGCGC AGGGCGGGAC GTTGCGACCT TTTACCGGAG AGACTCGTCT GTTCCTGTAT
CCCGGCAAGA CCTTTCAGGT AACCGACGGG CTGTTGACCA ATTTTCACCT TCCGGAATCC
ACTCTGCTCA TGCTGGTATG TGCCTTCGCC GGCATGGAGT GCATGCTCGC CGCCTATCGT
CATGCGGTGG CGGAGGGCTA TCGGTTTTTC AGTTATGGAG ACGCCATGTT GATTTCCCCT
CAGGCCGGAC GGCGATGA
 
Protein sequence
MHKKDFHYEL PDALIAQAPL PERSAARMLI VDGHQGTWED AWVRDLPGVL RPGDLLVLND 
TRVLPARLQA RKTTGGAVEL LLDRLLDARD GWFLAKSSKA LRPGMSIHLP GGAVATVEEK
DGMDVRLSLP ADVAWLPILE AGGSMPLPPY IRRAAEASDR ERYQTVYAAR PGAVAAPTAG
LHFDTELLDA LAARGVERTF VTLHVGAGTF LPVRSEDITE HPMHAETMEV SATTVAAVAA
ARARGGRVIA VGTTACRALE TAAQGGTLRP FTGETRLFLY PGKTFQVTDG LLTNFHLPES
TLLMLVCAFA GMECMLAAYR HAVAEGYRFF SYGDAMLISP QAGRR