Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1698 |
Symbol | |
ID | 6877679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1663547 |
End bp | 1664623 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789566 |
Product | hypothetical protein |
Protein accession | YP_002220127 |
Protein GI | 198283806 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.555013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACAG TTCGTTACAT CATGGTCGCA GCCTTGTTGA GTGCGGGGCT GCTCGGAACC GTTACCTCGG CCGCAGAGAG AACGTCCGTC TTGCCGCTCA AGGTAGTTCA TGCGGATCTT CCACTTCCCG GCAAGCCCGA TCAGGCCTAT GTGCCGATCA ATCAGCAGTC AACCGGGAAA GCCCCATTGA AAAAAGATAT CAATCGCTTT GACTATGAGT CGGTTGATCC GCAAAGGCAG TTGTTGTTTA TTTCCCATCT TGGGGCAGAC AGTGTCGATG TAGTCGATTT GCGCAACAAC CGCGTCATTG CGAACATCAA GGGCGTTCCT GCTGTGCATG GGGTGCTGGC CGTACCAGAG CTGGGTGAAG TATTTGCGAA TGCGACAGCG ATCAACCAAC TCGAAGTCAT TTCCGAGAAG ACATTGCACA TCATCGCCCA TGTGCCCACC GGTGTTCACC CCGACGGCAT GGCCTACGCG CCGAAGGTAC ACGAACTGTT CATCTCTGAC GAGACTGGGC AGACCGAAAC GGTGGTTGAT ACCCGCAACA ACCGGCGGGT CGCCACCATT GCCATGGGCG GCGAAGTTGG CAACTCGCAA TACGACCCCG TTAGCCAGCG GGTATTCGCT GATGTGCAGA CCCGTAACGA GATTGTGGCG ATCGATCCGC GCCGCAATGT GATCGTCCAG CGTTATCGGC TGCCGGATAC TTGTGTTCAT GACCACAGTC TGCTGATCGA CGCGCCAGCC CGTCTCGCTT TTGTTGCTTG CGACGGCAAC GCCAGGCTGC TGCTCCTCAA CATGCGCGAC ATGCACGTGC TGTCCGTGCA TAAAACCGGT CGTCATCCCG ACGTGCTCGC TTTCGACCCC GGGCTGCAGC GCCTTTATGT CGCCAGCGAA AGTGGTGTAG TAGCGGTCTT CCAACTTAAA GGAAAGCAGT TACGATTGCT TGGACGTAAT TATCTCGCCT ATGAAGCGCA CTCCGTGGCC GTTGATCCGC AAACCCATCG CGTTTATTTC CCGTTGCAGA ATGTGGATGG TCACGGAGTC TTGCGCATCA TGGCGCCGAC GCTGTAG
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Protein sequence | MRTVRYIMVA ALLSAGLLGT VTSAAERTSV LPLKVVHADL PLPGKPDQAY VPINQQSTGK APLKKDINRF DYESVDPQRQ LLFISHLGAD SVDVVDLRNN RVIANIKGVP AVHGVLAVPE LGEVFANATA INQLEVISEK TLHIIAHVPT GVHPDGMAYA PKVHELFISD ETGQTETVVD TRNNRRVATI AMGGEVGNSQ YDPVSQRVFA DVQTRNEIVA IDPRRNVIVQ RYRLPDTCVH DHSLLIDAPA RLAFVACDGN ARLLLLNMRD MHVLSVHKTG RHPDVLAFDP GLQRLYVASE SGVVAVFQLK GKQLRLLGRN YLAYEAHSVA VDPQTHRVYF PLQNVDGHGV LRIMAPTL
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