Gene Lferr_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1698 
Symbol 
ID6877679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1663547 
End bp1664623 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content56% 
IMG OID642789566 
Producthypothetical protein 
Protein accessionYP_002220127 
Protein GI198283806 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.555013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACAG TTCGTTACAT CATGGTCGCA GCCTTGTTGA GTGCGGGGCT GCTCGGAACC 
GTTACCTCGG CCGCAGAGAG AACGTCCGTC TTGCCGCTCA AGGTAGTTCA TGCGGATCTT
CCACTTCCCG GCAAGCCCGA TCAGGCCTAT GTGCCGATCA ATCAGCAGTC AACCGGGAAA
GCCCCATTGA AAAAAGATAT CAATCGCTTT GACTATGAGT CGGTTGATCC GCAAAGGCAG
TTGTTGTTTA TTTCCCATCT TGGGGCAGAC AGTGTCGATG TAGTCGATTT GCGCAACAAC
CGCGTCATTG CGAACATCAA GGGCGTTCCT GCTGTGCATG GGGTGCTGGC CGTACCAGAG
CTGGGTGAAG TATTTGCGAA TGCGACAGCG ATCAACCAAC TCGAAGTCAT TTCCGAGAAG
ACATTGCACA TCATCGCCCA TGTGCCCACC GGTGTTCACC CCGACGGCAT GGCCTACGCG
CCGAAGGTAC ACGAACTGTT CATCTCTGAC GAGACTGGGC AGACCGAAAC GGTGGTTGAT
ACCCGCAACA ACCGGCGGGT CGCCACCATT GCCATGGGCG GCGAAGTTGG CAACTCGCAA
TACGACCCCG TTAGCCAGCG GGTATTCGCT GATGTGCAGA CCCGTAACGA GATTGTGGCG
ATCGATCCGC GCCGCAATGT GATCGTCCAG CGTTATCGGC TGCCGGATAC TTGTGTTCAT
GACCACAGTC TGCTGATCGA CGCGCCAGCC CGTCTCGCTT TTGTTGCTTG CGACGGCAAC
GCCAGGCTGC TGCTCCTCAA CATGCGCGAC ATGCACGTGC TGTCCGTGCA TAAAACCGGT
CGTCATCCCG ACGTGCTCGC TTTCGACCCC GGGCTGCAGC GCCTTTATGT CGCCAGCGAA
AGTGGTGTAG TAGCGGTCTT CCAACTTAAA GGAAAGCAGT TACGATTGCT TGGACGTAAT
TATCTCGCCT ATGAAGCGCA CTCCGTGGCC GTTGATCCGC AAACCCATCG CGTTTATTTC
CCGTTGCAGA ATGTGGATGG TCACGGAGTC TTGCGCATCA TGGCGCCGAC GCTGTAG
 
Protein sequence
MRTVRYIMVA ALLSAGLLGT VTSAAERTSV LPLKVVHADL PLPGKPDQAY VPINQQSTGK 
APLKKDINRF DYESVDPQRQ LLFISHLGAD SVDVVDLRNN RVIANIKGVP AVHGVLAVPE
LGEVFANATA INQLEVISEK TLHIIAHVPT GVHPDGMAYA PKVHELFISD ETGQTETVVD
TRNNRRVATI AMGGEVGNSQ YDPVSQRVFA DVQTRNEIVA IDPRRNVIVQ RYRLPDTCVH
DHSLLIDAPA RLAFVACDGN ARLLLLNMRD MHVLSVHKTG RHPDVLAFDP GLQRLYVASE
SGVVAVFQLK GKQLRLLGRN YLAYEAHSVA VDPQTHRVYF PLQNVDGHGV LRIMAPTL