Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1657 |
Symbol | |
ID | 6877637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1623667 |
End bp | 1626150 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642789524 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_002220086 |
Protein GI | 198283765 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.188521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCA CGGAGCATGA TCCGGTGGCA TGCGGTCTGA GCAGCGCCGC CGCCTCGTCG TTGCAGCAAC AGTACGGGCT CAATCGTCTG CCCACGGCGC ATGCGCCGCG CTGGTGGCAA CAACTGCTGG CGCAGTTTCG TAACACCCTC ATCGCGATTC TGCTGGCCGC TGCACTCTTA TCGCTGGTAC TCGGACATCT GGTAGACGGC GCGGTCATCG GCGCGGTGAT CCTGATCAAC ACCCTGCTCG GCTTTGTTCA GGAGAACCGC GCGGAGAAAG CCGTGCAGGC ACTGCAATCT TTTCTCGCCC CACAGGTGTT GGTCTGTCGC GATGGCGCCT GGCAACATCT GCCCGCTGAA GCACTGGTGC CCGGCGACTG GGTACGGGTG GAAAATGGTG CACGTATCAG CGCGGACATG CGCTTGCTGG AGGCGCATGC CCTGCGGGTG GACGAATCCC TGCTGACGGG GGAGTCCGTC CCGGTGGATA AAACCACTTC TGGCGACGAG GGCGAGTTAC TGCTGCGAGC CGGAACGCTG GTAACCGGGG GAGATGGTGT TGGCCAGGTG ACCGCCACCG GCAGCGCCAC CGAAATAGGC CGAATCCACC AGCTCATGGG AGGCACCCTG ACCATGCGCT CGCCGCTGCT GGAGCGCATC AGCCGTTTGT CCCGGACTCT CGCCTTCACC GTCGTTCTTC TGGCAGCCAT CGCGACGGGT ATCGCCTGGT GGCGGGGCGA GGCGCTGGAA TTTGCCCTGC TCGCCGCCAT CAGTCTGGCG GTAGCCATTA TTCCCGAAGG ATTACCAGCG GTCATCAGTG TGACCCTGGC GCTGGGCGTG CAGCGTATGG CGCAACGGGG TGCCATTGTC CGCCAGTTAC CGGCGGTGGA AACCCTGGGC ACGGTTACCG TCATTTGCAC CGATAAAACG GGCACCCTGA CAGAAAATCG TATGACCGTG CAGGACCTGA CCCTCGCCGA TGACTCCCCT GCCCTGCTGC AACGTGCCCT GCGGGTCATG ATTTTGTGTA ATGACGCCCA ACTACGCAAC GACAAGAGCG GTATTGGTGA CCCTCTGGAA CAGGCTCTGC TCCGCTATGC GGGCACGCAT GGTGCGGACG TCGAGGTGTC GCGGATGGCA TCTCCGCGGG TGGATGCCCG GCCTTTCAGC CACGAGCAGC CCTTCATGGC GACGCGCCAC AGCGACGGCA TCGCCATTAA AGGTGCCCCG GAATGGGTCC TGCAACGCTG TCAGCGGATG GCGACCGCAA GCGGGGTGGC GGAAATCGAT CCGGCCTATT GGCACAAAGT CATTGGGGAC ATGGCGATGG CCGGCATGCG TACCCTTGCC CTGGCCAGCG CGGTAGATGG GCAGTGGGAG GCTCTGGACG ATGGTGGCTG GACCTGGTTG GGTGTTGTCG CGTTGCTGGA TCCCCCGCGT GCCGCCGTAC CGGCCGCCAT TGCTGCCTGC CGCAGTGCGG GTATCCGGGT GATCATGGTT ACCGGCGATC ATCCGCAGAC GGCGGCCACT ATCGCCCGTC AGGTCGGCAT TCTGGAGGAT GGTCCGGCGG CGGTGGTCGA TCATGCCCAG TGGGCCAGCG CGGATGCCGA GAAACGGCAG GCCCTGGCCC GCGACGCGGT GGTCTTCGCC AGAGTACAGC CCGCCGATAA GCTGGAACTG GTGCAGACCC TGCAGGCCAG CGGCGAGGTG GTCGCCATGA CCGGTGACGG CGTCAACGAT GCACCCGCCT TGCGCCGGGC GCAGATTGGT GTGGCCATGG GGAAATCGGG GAGCGACGTG GCTCGTGAGG CGGCGGCCAT GGTGCTGAGT GACGACAACT TTACCCATAT CGCCACCGCC GTAGCGGAGG GGCGCCACAT CTATGACAAT ATCCGGCGCA CGACTTTCTT TATGCTGCCG ACTAATTTTG CGCAAGGGCT GGTGATTTTT TTCGCGGTGC TGTCGGGAAT GACCCTGCCT ATTACGCCAT TGCAAATACT TTGGGTGAAT ACGATTACCG CCAGTACGCT GACCCTGGCG TTGGCATTCA TGGGGGCGGA TAAAGGCGTG ATGGAGCGCA AACCGCGTCC GGCCCGGGAG GCGCTCATTC CAGGGACTTT ATGGTGGCGT ATCGTCGGAT TGAGTACCTT TCTGGTTATA ACCGTCTTTG CGGTGTTTTT TGGCGATGCG ACTCTGCACA GCGACAGCCA TGCGCATACC CTGGCGGTGA ATGCCATGGT GGGCATGGAG GCCGGAATAC TGCTGGCCAT GTATGGGCGC CGGCGTCATG ACCGGGGGGA TGTCGTCCTG GTGGTAGCGA TGTTGGCTGC TTTGGTTGCC CAGGGGCTTT TCTCCTGGCT GCCATTTTTT CAGCGGGTAT TCGCGACAAC GGCCATGGGG GGGGCGGATA TGGGGATCAT TGCCGTCTGC GCGGCGTTGG CGTGGCTGGC TGGCAAGCTT GCGGCGCCGC CGCAGGCTGC TTGA
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Protein sequence | MDATEHDPVA CGLSSAAASS LQQQYGLNRL PTAHAPRWWQ QLLAQFRNTL IAILLAAALL SLVLGHLVDG AVIGAVILIN TLLGFVQENR AEKAVQALQS FLAPQVLVCR DGAWQHLPAE ALVPGDWVRV ENGARISADM RLLEAHALRV DESLLTGESV PVDKTTSGDE GELLLRAGTL VTGGDGVGQV TATGSATEIG RIHQLMGGTL TMRSPLLERI SRLSRTLAFT VVLLAAIATG IAWWRGEALE FALLAAISLA VAIIPEGLPA VISVTLALGV QRMAQRGAIV RQLPAVETLG TVTVICTDKT GTLTENRMTV QDLTLADDSP ALLQRALRVM ILCNDAQLRN DKSGIGDPLE QALLRYAGTH GADVEVSRMA SPRVDARPFS HEQPFMATRH SDGIAIKGAP EWVLQRCQRM ATASGVAEID PAYWHKVIGD MAMAGMRTLA LASAVDGQWE ALDDGGWTWL GVVALLDPPR AAVPAAIAAC RSAGIRVIMV TGDHPQTAAT IARQVGILED GPAAVVDHAQ WASADAEKRQ ALARDAVVFA RVQPADKLEL VQTLQASGEV VAMTGDGVND APALRRAQIG VAMGKSGSDV AREAAAMVLS DDNFTHIATA VAEGRHIYDN IRRTTFFMLP TNFAQGLVIF FAVLSGMTLP ITPLQILWVN TITASTLTLA LAFMGADKGV MERKPRPARE ALIPGTLWWR IVGLSTFLVI TVFAVFFGDA TLHSDSHAHT LAVNAMVGME AGILLAMYGR RRHDRGDVVL VVAMLAALVA QGLFSWLPFF QRVFATTAMG GADMGIIAVC AALAWLAGKL AAPPQAA
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