Gene Lferr_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1550 
Symbol 
ID6877525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1507398 
End bp1508036 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content60% 
IMG OID642789413 
Productputative partition-related protein 
Protein accessionYP_002219979 
Protein GI198283658 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00131235 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCCGGG TGCTGGTGCT CAACAGTAAA GGAGGTGCCG GAAAAACAAC CGTCGCCACC 
AATCTCGCCA GCCTGCTGGC ACTGCGCGGT TCGGTGCTCC TCGCCGACCT GGACCCACAG
CGCTCGTCCA GCACCTGGGC CGGGCGACGA TCGGAACACC TCCCCAAGCT GTCCGTCATT
ACCGATGCCG ACCGGGATTT CCGCGATTAT CCACCCACGG ATTTCGTGGT CTTTGACGCC
CCTGCCGGTC TCAAGAAAGG GCGTCTGGAA GACATGCTGG GGGAGGTGGA AGCGTTGCTG
GTGCCCATCG GACCATCTTC CTTCGATATG GACGCCAGCC GCGTCTTCCT GGAACAACTG
AAGGAAATAA AACGCTTTCG TAAGGGAAAG GTGCGCATGG GCGTGATTGC CAACCGGGTG
AATGCGCGTA CCAAGGGCGG ACAGCATTTG CAGACCTTTC TTGCGGATTT GCAATTGCCG
GTAGTGGCCA CCCTGCGCGA CAGCGAACTT TATGTGAGGG CGGCGCAACT GGGTGCGGGA
GTGGCAGACC TACGCGCCGC CGAAACCCGG GCCGATCTGC CGCAATGGGC GCAGATTCTG
CGTTTCGTGA TGGAAGGGAA ATATGGAACA GGAGCTTAA
 
Protein sequence
MIRVLVLNSK GGAGKTTVAT NLASLLALRG SVLLADLDPQ RSSSTWAGRR SEHLPKLSVI 
TDADRDFRDY PPTDFVVFDA PAGLKKGRLE DMLGEVEALL VPIGPSSFDM DASRVFLEQL
KEIKRFRKGK VRMGVIANRV NARTKGGQHL QTFLADLQLP VVATLRDSEL YVRAAQLGAG
VADLRAAETR ADLPQWAQIL RFVMEGKYGT GA