Gene Lferr_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1457 
Symbol 
ID6877431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1414986 
End bp1415198 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content62% 
IMG OID642789328 
Producttranscriptional regulator, AbrB family 
Protein accessionYP_002219895 
Protein GI198283574 
COG category 
COG ID 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.203506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CAGCCACCTT GTCGAGCAAG TTCCAGATTT CCATCCCCAA GGCCGTGCGC 
GAAGAGCAGC ACTGGGAAGC CGGGCAGGAG TTCGTGTTCA TTCCCAAGGG CAAGGGCGTG
CTGGTGATGC CGGTGCCCGA GATGGCGCAG TTGGTCGGTA TCGCCAAGGG CGCCCGCACC
GACAATGTTC GTGATCGCGA GGATCGCTAC TGA
 
Protein sequence
MTATATLSSK FQISIPKAVR EEQHWEAGQE FVFIPKGKGV LVMPVPEMAQ LVGIAKGART 
DNVRDREDRY