Gene Lferr_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1432 
Symbol 
ID6877406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1388245 
End bp1389369 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content62% 
IMG OID642789304 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002219871 
Protein GI198283550 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.517371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGATC CAAATTCAGA GCACGGTGCC GAACTCCGCA AGATCATCCA TGTGGACATG 
GATGCCTTCT TTGCGGCGGT GGAGCAAAGG GACTATCCCG AGCTGCGGGG TCAGCCCGTC
ATCGTCGGCG GCGATCCTGC CGGCCGGGGC GTTGTGGCCA CTTGCAGCTA TGAAGCCCGC
CGCTTTGGCA TTCACTCCGC CATGACGGCG GCACGGGCCC GCTCCCTCTG CCCGCAGGCA
ATCTTTGTCC GTCCCCGCAT GGAAGCCTAT CGAGAGGCCT CCCGTCAGGT TATGGCTATC
CTGCGCAGTT ACACACCGCT CGTGGAGCCA CTGTCGCTGG ATGAGGCCTT TCTGGACGTC
ACTGCTGCCA CCGCCGATGG TATCCTGGCG GTCGAAATCG CCCGCGAGAT ACTGGACCGC
ATTCATCGGG AAACGAGGCT GACCGCTTCG GCAGGGGTCT CCTATAATAA GTTGCTCGCC
AAGCTCGCCT CCGACTGGCG TAAGCCCCAG GGGCTTTTCG TTATCCCGCC CAAACGTGGT
CTCGACTTCT TGGCGCCGCT GCCCGTTGGC AAACTGCATG GTGTGGGCCC GGCCACTGTA
AAAAAACTAT CCGCTATGGG TATCGACACC GTCTCGGATC TGCGGGCGAT GGCGCAGGAG
AGGTTGATTA GGTGTTTCGG TAAGGCTGGA GCTTGGTTTT ACGAAGTGGC GCGGGGGATC
GATAGGCGGC CCGTGCAGCC GACCCGCCAA CGGAAATCGG TGGGTACCGA GCGGACCTTC
TCGGAAAACC TGGAGGATCG AGGGACCATG CTGGCCACGT TACAGCAGAT GGCCGAGCAG
GTTGCGGCCC GTCTCCAGGC ACTCGCCTTG GCGGGCTACA CGGTGAACAT CAAGGCACGT
TTTCCCGATT TTGCCACGGT CACCCGAGCG CATACAGCGA CCGAGGTCAC CGGGAACACG
GAAGCCATCG CGGCGTTGCT AACAGAACTA CTGGATAGAG CAGTTCCCCA GGGTGCGTCC
GTGCGCCTGC TAGGAATCAC AGTGAGCGGC CTCGTCCAAA TCCAGGCGGC GAGCCGAGGC
GCCCGCCAGC TGAACTTGCT GGACGGAATC CCCGATCTGC GGTAA
 
Protein sequence
MPDPNSEHGA ELRKIIHVDM DAFFAAVEQR DYPELRGQPV IVGGDPAGRG VVATCSYEAR 
RFGIHSAMTA ARARSLCPQA IFVRPRMEAY REASRQVMAI LRSYTPLVEP LSLDEAFLDV
TAATADGILA VEIAREILDR IHRETRLTAS AGVSYNKLLA KLASDWRKPQ GLFVIPPKRG
LDFLAPLPVG KLHGVGPATV KKLSAMGIDT VSDLRAMAQE RLIRCFGKAG AWFYEVARGI
DRRPVQPTRQ RKSVGTERTF SENLEDRGTM LATLQQMAEQ VAARLQALAL AGYTVNIKAR
FPDFATVTRA HTATEVTGNT EAIAALLTEL LDRAVPQGAS VRLLGITVSG LVQIQAASRG
ARQLNLLDGI PDLR