Gene Lferr_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1429 
Symbol 
ID6877403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1385042 
End bp1385458 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content50% 
IMG OID642789301 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_002219868 
Protein GI198283547 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.165331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA AAGTAGTATC TTGTCGTTGT GGTGCCGTGG AATTACGTAT TACCGGCGAA 
CCTATCGCGC AACTCTATTG CCATTGCGAT GACTGTCAGG CAGCTCATGC GGCAGCGTAT
GTTCCTGTCG CAATCTACCC GGCACAGGCT GTGGAAGTCG TCAAAGGAAA TCCTATTCCG
ATGGCAGTCA ATACACTTCC AAGAATGCGC TGTGCAGAAT GTGGCACACA CCTGTTCAAT
GACGTTGTAA GTCATGGTTT GCGAAATGTG AATGGGTACC TTCTCCCAAA AGAGGAGTTC
AAACCCCAAT GCCATGTTCA GTGCCAATAC GCAGTTCTTC CCGTTGTCGA TGATTTGCCA
CATTACAAGG CGCTTCCTGC TGCATTCGGC GGTTCCGATG AGGTCGTTCC CTGGTGA
 
Protein sequence
MNAKVVSCRC GAVELRITGE PIAQLYCHCD DCQAAHAAAY VPVAIYPAQA VEVVKGNPIP 
MAVNTLPRMR CAECGTHLFN DVVSHGLRNV NGYLLPKEEF KPQCHVQCQY AVLPVVDDLP
HYKALPAAFG GSDEVVPW