Gene Lferr_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1375 
Symbol 
ID6877349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1333600 
End bp1335951 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content59% 
IMG OID642789248 
Productvon Willebrand factor type A 
Protein accessionYP_002219815 
Protein GI198283494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4548] Nitric oxide reductase activation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG AACTCGAAAA GTACCAGGAC ATATTGGCCG AACTCGGGGA GCACGCCGTC 
GAAGTGCTGC GTGCCTCCTG GGATGAGGCA GCGCGAGTAT TCACCCCGCG TGGACTGGAA
AATTACTATT TGAATGGCGC GACCAGCCTG AAATCCCTGG GACGCGGCAC TGATCTAGTG
GTGTCGTTCA TTCAGAGCGC ACCGGCGGTG GCGCACGAAC TGGGCGAAGA TGCCGTCCGC
GAAATGCTGG CCGCCGCCAT CAAGATGTAC TCCAAGACCA GCGCTACCGT CATTGCCGCG
ATGTTTTCCA GCAGTCCCGT GGCGGCTGCG CGGCTGGGTG ATCCGGAGCT GTTCCGTGGC
TATTTGCACT TGCTCGACAC CCTGCTCGCG CAAGCTCCGC GCGGCGTGCG TCCGATGCTG
GATCACCTCA GCACACTCCT GGGCCAGCTT ACCCTGGGCG GGCTGCGGCG CTGGGCGCTG
TGGGGCGCGC AGGCGCACAA GACCGACTTC GACGGCCAGG CAAAATATTT CGCGCTGGAA
AGCCCGGAAT CCATCGGCGT ACTGCAAAAA GAACGCAAGG GCACACTGTT CATCGATGTG
CAGCGCCGCA TCAGCATGTA TTTGCGCGCG CTATGGGGCC GCGATTTCTT CATGCGTCCC
ACCAGCGGCG ACTTCGAGCA GCGCGAAGGC TACCGCCCCT CGATCGAGGG GTACATCATA
CATCTCCCCG ATGCGTATGA TGATCTGGTG TGGCAGGCAC CGTCAGGTGA GGAAACGCAC
ATTCACGGCA TTGAGCTATA CCGCGCCAGT GCCGCCCACG CGGCCTGCCA TCAGGTATAC
ACCACAGACC AATTCGACAG CACTGGGCTA AGTACATTGC AGAGTGCGCT TATTGGCCTG
ATCGAAGATG CGCGCGTGGA AACCATTGCC CTCAAGCAAT TTCCTGGCCT CAGGCACATT
TGGTTGCCGC TGCACACGGC AACGCCCGCG TCTGGCAATG AAGCCGCGTC CTTGATGGCG
CGTCTGGCGC ATGCACTACT AGACCCGGAT TACCGCGATG ACCATCCTTG GGTGGCGATG
GGTCGCCAGA TATTCAGCGA GCAACAGGAA CGGCTGGTCT CCACCGAATG GTCGCGGGAG
GTCGGGCTGC GCCTTGCCGC GGAAATGCTG CAGCTCGGTG TGGCCTATTC AGCCACTACT
GATGTGCCAG ATATCCCCTA CCGCGATGAC AACCGTTATA TGTGGGAGTT CGAGGATATC
CGCGCAGACG GGCAGGTAAT CGCCGGCGTC ACCACACAGC AAATCCGCAA GTACGTCAGC
GTGATGGAAA TGGTCAACGC CCTCGACGTG CCCGGCGCAG GCGACGACGC GAACGAAATA
TGGGTGCTAT CCAGCGAATT TTTCCGCGAC GAGGAACCCA CCAGTCTGAA CCAGCAGGAG
GGGCGCGAGC CACCGCCGGA TCCCTACCAT TACCCGGAGT GGGACTACCA GATGCAGTTG
GAGCGCCCAG AGTGGTGCAC CGTACTGGAA AAGCGTGCCA AGAGTGGCAC GTTGGAGACC
ATCCATGAAA TTGTAGCCAA GCACAAACCT ATCATCGGCC GACTCAAGTT TCTGATCGAA
GCATTGCAGC CGCAAGGGGT GCAGCGCCTG CGCAAGCAGG AGGATGGCGA CGAAATCGAC
CTGAACGCCG CTGTGCGCGC CATGATCGAG ATGCGTATGG GCGAGCAGCC CGATCCGCGC
ATCATGATGC GCAATGTGCG CAAGGTGCGT GATCTCTCGG TGCTGCTGCT GATCGACTTA
TCCGAATCTA CCAATGACCC GGTGCTGGGT TCGAACAGCA CCGTGTTACA ACTGGCACGT
GAGGCCACGG TGCTGCTCGC CGATGCCCTC GACAAGATCG GCGACCCCTT CGCCATTCAT
GGATTCGATT CAAACGGCCG CCACGATGTG GAATATTTTC GCTACAAGGA TTTCGGTGCG
TCTTACAACG ATCAGGCCAA ATCTCGCCTG GCGGGTATGA GCGGACAGTT ATCCACGCGC
ATGGGCGCGG CGATCCGTCA TGCCGGCTCG ATTTTGAAAC GTCAGCCCAG CAACAAAAAA
CTGTTGCTGG TGATCACCGA CGGTGAGCCG GCGGATAACG ATGTGCGCGA TCCCCAATAC
CTGCGATATG ACGCCAGGAA AGCGGTGGAA GATCTGACCC AAGCCGGCAT CGCGCCCTAC
TGCCTGAGTC TTGATCCCAG AGCCGACCAG TATGTATCCC GCATTTTTGG CGCAAAGAAC
TATGTGGTTC TGGATCACGT GCAGAGGCTG CCAGAAAAGC TGCCGATCCT TTACATGGGA
CTCACCCGAT GA
 
Protein sequence
MAVELEKYQD ILAELGEHAV EVLRASWDEA ARVFTPRGLE NYYLNGATSL KSLGRGTDLV 
VSFIQSAPAV AHELGEDAVR EMLAAAIKMY SKTSATVIAA MFSSSPVAAA RLGDPELFRG
YLHLLDTLLA QAPRGVRPML DHLSTLLGQL TLGGLRRWAL WGAQAHKTDF DGQAKYFALE
SPESIGVLQK ERKGTLFIDV QRRISMYLRA LWGRDFFMRP TSGDFEQREG YRPSIEGYII
HLPDAYDDLV WQAPSGEETH IHGIELYRAS AAHAACHQVY TTDQFDSTGL STLQSALIGL
IEDARVETIA LKQFPGLRHI WLPLHTATPA SGNEAASLMA RLAHALLDPD YRDDHPWVAM
GRQIFSEQQE RLVSTEWSRE VGLRLAAEML QLGVAYSATT DVPDIPYRDD NRYMWEFEDI
RADGQVIAGV TTQQIRKYVS VMEMVNALDV PGAGDDANEI WVLSSEFFRD EEPTSLNQQE
GREPPPDPYH YPEWDYQMQL ERPEWCTVLE KRAKSGTLET IHEIVAKHKP IIGRLKFLIE
ALQPQGVQRL RKQEDGDEID LNAAVRAMIE MRMGEQPDPR IMMRNVRKVR DLSVLLLIDL
SESTNDPVLG SNSTVLQLAR EATVLLADAL DKIGDPFAIH GFDSNGRHDV EYFRYKDFGA
SYNDQAKSRL AGMSGQLSTR MGAAIRHAGS ILKRQPSNKK LLLVITDGEP ADNDVRDPQY
LRYDARKAVE DLTQAGIAPY CLSLDPRADQ YVSRIFGAKN YVVLDHVQRL PEKLPILYMG
LTR