Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1363 |
Symbol | |
ID | 6877337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1320887 |
End bp | 1322224 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642789236 |
Product | hypothetical protein |
Protein accession | YP_002219803 |
Protein GI | 198283482 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.301719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGACG CCGACAATAA AATCATCGTC ATCGATGACG ACCCCACGGG TTCGCAGACG GTGCATTCGT GCCTGCTGCT CACGCGCTGG GATGTGGAAA CGCTGGCCAT CGCTCTGCGC GATGCGGCTC CGCTCTTTTT CATCCTCAGC AACACCCGGG GCATGGTGGG GGAGCGAGCG GCGGCGGTCA CCCGCGACAT CTGCCGGAAT CTGCGGGTGG CACTGGATCG AGCAGCAGCG GCGGGGCGGG CGGTGCGGCC TATTCTGGTG AGTCGTTCCG ACTCCACCTT GCGCGGCCAT TATCCGGTGG AAACCGACGT GATGGCCGAA GAGTTGGGGC CCTTCGACGC CCATTTTCTT ATTCCCGCCT TTTTTGAGGG CGAACGCATC ACGCGGGACG GCGTGCATTA CGTGCGCCAG AACGGTGTGG AGACGCCCGC CCATAAGACC GAATTTGCGA AGGATTCGGT GTTTGCCTTT CATCACGGCT TTCTGCCGGA CTACGTGGAG GAGAAGACTC AGGGACGGAT TCCGGCGGCG GCGGTGGAGC GCTTCACACT GGCGGAGTTG CGCGCGGGCT GCCTGGGGCA CCTTCTGGCC CTGAGGGACA ACGTTTGCGC CGTGGTGGAT GCGGTGGAAC CTGCGGACCT CGCCGCCTTT GCCCGGGATT TACGGGCTGC CGCGGCACAA GGCAGGCGCT TTCTCTTCCG TAGTGCCGCT AGCCTGTTGA CGGCGCTGGC GGACTTACCG CCGCAACCTG TGGCGGCCAA GGATATGGCG CAACTGGTGC GCGGTAGCCG GGCCGGTGCC ATCGTCGTCG GCTCGCACGT GCGCAAAACC ACGGAGCAAC TGGACTGTCT GCTCCTGGAA CCCGGCTTGG AGGCTATAGA GGTCGATGTG GACCGTTGTG CGGGCGCGCA GCGCCCTGCA CAGTTGGAGG CCATTGTGCG GCGAGCGGCG GCGGCTCACG GCAAAGGGCT GGATGTCGTC ATCTACACGA GCCGTGGTGA GCGCCGTTTT GCCGATCAAG CTGCCCGTCT GGCCTTTGGG GAGGCCGTGT CGGCCTTCTT GATGGAGGTG GTCCGAAGCT TGCCGGAGGA TCTCGGTTTC CTCATCAGCA AGGGCGGCAT CACTTCCAAC GATGTCCTCA GCGACGGCCT CGCCCTGCGC ATGGCGCGGG TCATGGGGCA GATACTGCCG GGCTGCTCTG TGGTGGTCTG CCCCGCCGAT CACCCTCGCA CCCCCCAACT GCCGGTGGTG ATTTTCCCCG GCAATGTGGG GGATGCAGGG AGCCTCGCCC TCGCCCGCCG CCGCTTACGC GGCGACGCCC CTGCGTGA
|
Protein sequence | MVDADNKIIV IDDDPTGSQT VHSCLLLTRW DVETLAIALR DAAPLFFILS NTRGMVGERA AAVTRDICRN LRVALDRAAA AGRAVRPILV SRSDSTLRGH YPVETDVMAE ELGPFDAHFL IPAFFEGERI TRDGVHYVRQ NGVETPAHKT EFAKDSVFAF HHGFLPDYVE EKTQGRIPAA AVERFTLAEL RAGCLGHLLA LRDNVCAVVD AVEPADLAAF ARDLRAAAAQ GRRFLFRSAA SLLTALADLP PQPVAAKDMA QLVRGSRAGA IVVGSHVRKT TEQLDCLLLE PGLEAIEVDV DRCAGAQRPA QLEAIVRRAA AAHGKGLDVV IYTSRGERRF ADQAARLAFG EAVSAFLMEV VRSLPEDLGF LISKGGITSN DVLSDGLALR MARVMGQILP GCSVVVCPAD HPRTPQLPVV IFPGNVGDAG SLALARRRLR GDAPA
|
| |