Gene Lferr_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1363 
Symbol 
ID6877337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1320887 
End bp1322224 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID642789236 
Producthypothetical protein 
Protein accessionYP_002219803 
Protein GI198283482 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.301719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACG CCGACAATAA AATCATCGTC ATCGATGACG ACCCCACGGG TTCGCAGACG 
GTGCATTCGT GCCTGCTGCT CACGCGCTGG GATGTGGAAA CGCTGGCCAT CGCTCTGCGC
GATGCGGCTC CGCTCTTTTT CATCCTCAGC AACACCCGGG GCATGGTGGG GGAGCGAGCG
GCGGCGGTCA CCCGCGACAT CTGCCGGAAT CTGCGGGTGG CACTGGATCG AGCAGCAGCG
GCGGGGCGGG CGGTGCGGCC TATTCTGGTG AGTCGTTCCG ACTCCACCTT GCGCGGCCAT
TATCCGGTGG AAACCGACGT GATGGCCGAA GAGTTGGGGC CCTTCGACGC CCATTTTCTT
ATTCCCGCCT TTTTTGAGGG CGAACGCATC ACGCGGGACG GCGTGCATTA CGTGCGCCAG
AACGGTGTGG AGACGCCCGC CCATAAGACC GAATTTGCGA AGGATTCGGT GTTTGCCTTT
CATCACGGCT TTCTGCCGGA CTACGTGGAG GAGAAGACTC AGGGACGGAT TCCGGCGGCG
GCGGTGGAGC GCTTCACACT GGCGGAGTTG CGCGCGGGCT GCCTGGGGCA CCTTCTGGCC
CTGAGGGACA ACGTTTGCGC CGTGGTGGAT GCGGTGGAAC CTGCGGACCT CGCCGCCTTT
GCCCGGGATT TACGGGCTGC CGCGGCACAA GGCAGGCGCT TTCTCTTCCG TAGTGCCGCT
AGCCTGTTGA CGGCGCTGGC GGACTTACCG CCGCAACCTG TGGCGGCCAA GGATATGGCG
CAACTGGTGC GCGGTAGCCG GGCCGGTGCC ATCGTCGTCG GCTCGCACGT GCGCAAAACC
ACGGAGCAAC TGGACTGTCT GCTCCTGGAA CCCGGCTTGG AGGCTATAGA GGTCGATGTG
GACCGTTGTG CGGGCGCGCA GCGCCCTGCA CAGTTGGAGG CCATTGTGCG GCGAGCGGCG
GCGGCTCACG GCAAAGGGCT GGATGTCGTC ATCTACACGA GCCGTGGTGA GCGCCGTTTT
GCCGATCAAG CTGCCCGTCT GGCCTTTGGG GAGGCCGTGT CGGCCTTCTT GATGGAGGTG
GTCCGAAGCT TGCCGGAGGA TCTCGGTTTC CTCATCAGCA AGGGCGGCAT CACTTCCAAC
GATGTCCTCA GCGACGGCCT CGCCCTGCGC ATGGCGCGGG TCATGGGGCA GATACTGCCG
GGCTGCTCTG TGGTGGTCTG CCCCGCCGAT CACCCTCGCA CCCCCCAACT GCCGGTGGTG
ATTTTCCCCG GCAATGTGGG GGATGCAGGG AGCCTCGCCC TCGCCCGCCG CCGCTTACGC
GGCGACGCCC CTGCGTGA
 
Protein sequence
MVDADNKIIV IDDDPTGSQT VHSCLLLTRW DVETLAIALR DAAPLFFILS NTRGMVGERA 
AAVTRDICRN LRVALDRAAA AGRAVRPILV SRSDSTLRGH YPVETDVMAE ELGPFDAHFL
IPAFFEGERI TRDGVHYVRQ NGVETPAHKT EFAKDSVFAF HHGFLPDYVE EKTQGRIPAA
AVERFTLAEL RAGCLGHLLA LRDNVCAVVD AVEPADLAAF ARDLRAAAAQ GRRFLFRSAA
SLLTALADLP PQPVAAKDMA QLVRGSRAGA IVVGSHVRKT TEQLDCLLLE PGLEAIEVDV
DRCAGAQRPA QLEAIVRRAA AAHGKGLDVV IYTSRGERRF ADQAARLAFG EAVSAFLMEV
VRSLPEDLGF LISKGGITSN DVLSDGLALR MARVMGQILP GCSVVVCPAD HPRTPQLPVV
IFPGNVGDAG SLALARRRLR GDAPA