| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1346 |
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| Symbol | |
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| ID | 6877320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1298504 |
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| End bp | 1299988 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642789220 |
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| Product | protease Do |
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| Protein accession | YP_002219787 |
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| Protein GI | 198283466 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.62004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA TCCAATGGAA AAGACCACGC TATATAGTAT CCCTTGCTGT TGCCGTTGCG
TTGGGTTTCG GACTGGGAGC AACGGGATGG GTTTTTGGGG AATCAGGTCA TACCATTACG
CCTCTGCCCT CACCAAGTGA GGCAGAAACA AGGCCAAGAT TGGTCAAGAT ACCGGACTTT
AGCCCAATCG TAAAAAAATA TGGCAACGCA ATCGTTAGAA TCAGCGATTC TGACACAAAA
ATAGTTCATG AACATCAGGG GTTTTTTAAT CCATTTCCGA AAGACTCGCC GTTTTTTGGT
TTCTTTCGTG GGCTACCAAA TTACACGCCC CCGGAAAAGG AGGTGACCAA GGCTCTCGGG
TCTGGATTCA TCATCTCTCA CAACGGTTAC ATCGTCACGG CGGGACATGT CGTGAGAGGC
ATGCACCATA TTATGGTGAC CCTGAATAAT CATCACGCGT ATCGAGCCAA AGTGGTCGGA
TTATCCGTCC ATTATGATAC CGCGTTGCTG AAGATTCATG CCCACGATCT GCCTATCGTA
CAACTGGGGA ACTCAAAGAA CCTTCAGGTC GGTCAGTGGC TGCTGGCTAT TGGTATGCCG
TTTGGACTCT ATAACACCGT AACCCAAGGC GTGGTCAGCG CCATGAATAG ATCACTACCT
CATGATAATC AGTACATACC ATTCATTCAA AGCGATGTGC CCATCAATCC TGGAAATTCT
GGCGGTCCGC TTTTCAACAT GCGTGGACAG GTCGTCGGGA TCAATGATCA GATTTATACT
AACGATGGCG GCTACATGGG GTTATCCTTC AGCATCCCGA TTGATACCGC AATGCGTGCC
GTTCATGCAT TCGAGCGCCA TCAGAAAGTA AAATTTGGTT GGCTGGGTGT CGAAATTCAG
TCGGTGACGC CACAAATGGC GCAGGCGATG CACCTTCCGG AACCAGTAGG CGCATTGATC
GCGCAGGTTA TGCCCTCGAG TCCTGCGGCA AAAGCGGGCA TTAAGTCCGG GGAAGTGATC
GTGGCTTATG ATCACCGTCC TATTTACAAC GTTAGCACGC TCCCTCCATT AGTAGGTGAC
ACACCACCAG GCAGGATTGT GCCCATCGGC ATCCTCGATC ACGGGAAGCC CAGGACATTG
CAGGTTCAGG TCGGCGAGAT GCCGCAAAAG ATGCTGGTGG CTGCCGATCA ACAGAGCATC
GACATTCGTC GTCTAGGGGT ACGCGTTGGC ACCTTGGGAC CAAAGGAGCA GCAGAAACTC
GGGGTGGATC ACGGCGTATT GATTCAGTCC GTCTATCCGG GGCCAGCATC TTTTATTGGC
CTACGGAGTG GAATGGCGAT TTTGTCCATC AACCAACTGC GGGTAACCAG CCCTGAACAA
TTGGCTCAAC TGGTGAAATC TCTCCCTGCG AATACACCCA TTTCCATGCG TATTCGCAAT
CACCATGGGA GTATTTTCGT CGTGATTACG CTGCCCACAC GATAG
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| Protein sequence | MRKIQWKRPR YIVSLAVAVA LGFGLGATGW VFGESGHTIT PLPSPSEAET RPRLVKIPDF
SPIVKKYGNA IVRISDSDTK IVHEHQGFFN PFPKDSPFFG FFRGLPNYTP PEKEVTKALG
SGFIISHNGY IVTAGHVVRG MHHIMVTLNN HHAYRAKVVG LSVHYDTALL KIHAHDLPIV
QLGNSKNLQV GQWLLAIGMP FGLYNTVTQG VVSAMNRSLP HDNQYIPFIQ SDVPINPGNS
GGPLFNMRGQ VVGINDQIYT NDGGYMGLSF SIPIDTAMRA VHAFERHQKV KFGWLGVEIQ
SVTPQMAQAM HLPEPVGALI AQVMPSSPAA KAGIKSGEVI VAYDHRPIYN VSTLPPLVGD
TPPGRIVPIG ILDHGKPRTL QVQVGEMPQK MLVAADQQSI DIRRLGVRVG TLGPKEQQKL
GVDHGVLIQS VYPGPASFIG LRSGMAILSI NQLRVTSPEQ LAQLVKSLPA NTPISMRIRN
HHGSIFVVIT LPTR
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