Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1228 |
Symbol | |
ID | 6877201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1197332 |
End bp | 1197925 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642789105 |
Product | hypothetical protein |
Protein accession | YP_002219673 |
Protein GI | 198283352 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000102813 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCATCA GCATCGAACA AAGCGCGTTT GCAGGGCTCG ACACTCAGAA AAGACTGCTG AACCAGGTAT TCAAGGGCGA ACTGAGTGCG CAGGGACGCT TCGGTTTTCG CGGCGAGCTG GCTATCAAAT TTGCTACCGC CGTGGCCGAT GAAGCACGTC CACCGGAACT CCTCGCACAA CAAGTCATCA GTTCGGCAGA GCCGGGCGCT AAAAAGATTT CTTTTTTTTC CTGCTATCTT CTGTCTTTTG GGTATCTGGA CCCGCTGGTA ACGGCGTTGT CCGAGTATCT GGAACCCTCT GGTAAATATT TTATTTACTG CAACAATATC GACTTCAGCA AGCGTTACCA TCTGGAATAT AAGGGCATCC CATTTTATAT CCTGCCGCTG GATGAAGCGA CGGTCTACAA TGAGCTGCTG GAATTGTTCG GACTGGAACG CAACGATCTC AAAAAACTCG ACACGGCAGG TAAGATCAAT CGCATCGCCG AGAACGCCTT GCAATATAGT GCCGTATTCC CCGAGATCAG CTATGCAGAC TGCCTGGCGG GCATGGGTCC GGTACGTGAT CCCGGCGAAA ACCGGCCCGT ATAA
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Protein sequence | MSISIEQSAF AGLDTQKRLL NQVFKGELSA QGRFGFRGEL AIKFATAVAD EARPPELLAQ QVISSAEPGA KKISFFSCYL LSFGYLDPLV TALSEYLEPS GKYFIYCNNI DFSKRYHLEY KGIPFYILPL DEATVYNELL ELFGLERNDL KKLDTAGKIN RIAENALQYS AVFPEISYAD CLAGMGPVRD PGENRPV
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