Gene Lferr_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1228 
Symbol 
ID6877201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1197332 
End bp1197925 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content52% 
IMG OID642789105 
Producthypothetical protein 
Protein accessionYP_002219673 
Protein GI198283352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000102813 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCATCA GCATCGAACA AAGCGCGTTT GCAGGGCTCG ACACTCAGAA AAGACTGCTG 
AACCAGGTAT TCAAGGGCGA ACTGAGTGCG CAGGGACGCT TCGGTTTTCG CGGCGAGCTG
GCTATCAAAT TTGCTACCGC CGTGGCCGAT GAAGCACGTC CACCGGAACT CCTCGCACAA
CAAGTCATCA GTTCGGCAGA GCCGGGCGCT AAAAAGATTT CTTTTTTTTC CTGCTATCTT
CTGTCTTTTG GGTATCTGGA CCCGCTGGTA ACGGCGTTGT CCGAGTATCT GGAACCCTCT
GGTAAATATT TTATTTACTG CAACAATATC GACTTCAGCA AGCGTTACCA TCTGGAATAT
AAGGGCATCC CATTTTATAT CCTGCCGCTG GATGAAGCGA CGGTCTACAA TGAGCTGCTG
GAATTGTTCG GACTGGAACG CAACGATCTC AAAAAACTCG ACACGGCAGG TAAGATCAAT
CGCATCGCCG AGAACGCCTT GCAATATAGT GCCGTATTCC CCGAGATCAG CTATGCAGAC
TGCCTGGCGG GCATGGGTCC GGTACGTGAT CCCGGCGAAA ACCGGCCCGT ATAA
 
Protein sequence
MSISIEQSAF AGLDTQKRLL NQVFKGELSA QGRFGFRGEL AIKFATAVAD EARPPELLAQ 
QVISSAEPGA KKISFFSCYL LSFGYLDPLV TALSEYLEPS GKYFIYCNNI DFSKRYHLEY
KGIPFYILPL DEATVYNELL ELFGLERNDL KKLDTAGKIN RIAENALQYS AVFPEISYAD
CLAGMGPVRD PGENRPV