Gene Lferr_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1195 
Symbol 
ID6877168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1164903 
End bp1165997 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content62% 
IMG OID642789072 
ProductElectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_002219640 
Protein GI198283319 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.028424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA ACACTGCCGC ACCCGCAAAG CCCAAAGGCA AGAAGCGCCT GGAACTGGAC 
CCCCGCCTGG CCGCCTACAA GGGGATCTGG GTGTTTGTCG AAATGGAACG GGGTCAGGTA
CACCAGGTGT CCTGGGAGCT ACTGGGCGAA GGGCGCAAGC TGGCCGATAT TCTGAATGTC
GATCTGGGCG CCGTCATTCT CGGCGGCAGC AACGATGAAC TTGCCGCCGC TGCCCGCAGC
GCCTTCACCT ATGGTGCCGA TGTGGCCTAT ATCGTGGCTG ATCCCGTTCT CACGGACTAT
CGCAACGAAC CCTACACCAA GGCCATGACT GACCTGGTCA ACAAGTACCA GCCGGAGATT
CTGCTGCTGG GCGCCACCAC CCTGGGCCGC GATCTTGCCG GTAGTGTGGC GACCACTCTG
CTCACGGGTT TGACCGCAGA CTGTACAGAA CTCGCCATTG ACCCGGACAA TCGCGGACTA
CTCGCCACTC GTCCGACCTT TGGCGGCAGC CTGCTCTGCA CCATCCAGAC CCTGAACTAC
CGCCCACAAA TGGCCACCAT CCGCCCCCGG GTCATGGCCA TGCCCGATGC CATACCAGAA
CGCAGTGGTC GGTTCATTTC TGAAAACCTG CAGATGCAGG AAGACGACAT CATCGCCAAA
GTCCTGGAGT TCATCCCCGA CGAGGCCCAG GAGCAGGCGC AGCTCGCCTA TGCCGACATT
ATCGTGGCGG GCGGCCGGGG CATGGGCAAA GCCGAAAACT TTCGCCTGAT CTGGGACCTG
GCCGCTGTGC TCGGCGCCGA AGTGGGCGGA TCACGTCCGG TGACCCATGC CGGCTGGCTG
CCCGCTGATC GCCAGGTCGG GCAATCGGGC AAGACCGTGC GTCCCAAGCT TTATATTGCC
GCGGGCATCT CCGGGGCGAT TCAGCACCGC GTTGGCATGG AAGCCTCCGA CGTCATCATC
GCCATCAACA ACGATCCCCA TGCGCCCATC TTCGATTTTG CCACTTATGG CATTGTCGGC
GACGCCGTGC AGATCCTTCC CGTTCTCACC GACGCCTTTC GCAGCCGTCT GGCTGTGAAC
CGCCGGGCCA GTTAA
 
Protein sequence
MSENTAAPAK PKGKKRLELD PRLAAYKGIW VFVEMERGQV HQVSWELLGE GRKLADILNV 
DLGAVILGGS NDELAAAARS AFTYGADVAY IVADPVLTDY RNEPYTKAMT DLVNKYQPEI
LLLGATTLGR DLAGSVATTL LTGLTADCTE LAIDPDNRGL LATRPTFGGS LLCTIQTLNY
RPQMATIRPR VMAMPDAIPE RSGRFISENL QMQEDDIIAK VLEFIPDEAQ EQAQLAYADI
IVAGGRGMGK AENFRLIWDL AAVLGAEVGG SRPVTHAGWL PADRQVGQSG KTVRPKLYIA
AGISGAIQHR VGMEASDVII AINNDPHAPI FDFATYGIVG DAVQILPVLT DAFRSRLAVN
RRAS