Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1064 |
Symbol | |
ID | 6877035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1038587 |
End bp | 1040470 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788944 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_002219513 |
Protein GI | 198283192 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.932567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCC GTCCCACGGA TATGGTGAAT ACTATGCAGG ACGCAGCGGT AACCTGCGGC CCGATCCCCG GCTCACACAA GCGTTACCTC GGTGGCGTGC GTTTCCCGGA ATTGCGCATT CCCTTGCGGG AGATTCGGCA GAGCGACTCC CGGAAGCGGG ATGGCAGCCT CGAAGTCAAT CCGGCCATCC CGGTCTATGA TTGCAGCGGT CCCTACACCG ACCCGGACGT GGTCATCGAT ATTCATGCGG GCCTGCCCGC CATGCGCTGG CAATGGTCGC CGACGGATAC CGCCATCGAA AGCCGCCCCG AGCCCGGTTC CGCCTATGGT CGCGCCCGTC TGGCGGATGT CCGCACGGCG GATCTGCGTT TTCATCATCG CCGCGAAATT CGCCGGGCGG CCAACGGCGG CAACGTCTCC CAGATGCACT ATGCGCGGCG CGGTATCATC ACCCCCGAGA TGGAGTTCGT CGCCATCCGC GAGAATCAGG GTTTGGAGCA CCTGCGTGCC AGCCATCCGG CGCTGTTTCG CGCCCATCGC GGCGAGTCCT TCGGCGCGCA GATCCCCGAC ACCATTACCC CGGAATTTGT CCGCGATGAA ATCGCCCGGG GCCGCGCCAT CATCCCCGCC AATATCAATC ACCCGGAACT GGAGCCGATG ATCATCGGCC GGAATTTCCT GGTGAAGATC AACGCCAATA TCGGCAACTC CGCGGTCACC TCGTCCATTG CCGAAGAAGT GGAAAAAATG GTCTGGTCGA TCCGCTGGGG CGCCGATACG GTCATGGATT TATCCACCGG CAGGCATATT CACGAAACCC GCGAATGGAT TATCCGCAAT AGCCCGGTTC CCATCGGGAC CGTGCCGATT TATCAGGCCC TGGAGAAGGT CGATGGGAAG GCCGAAGACC TCACCTGGGA TTTGTTCCGG GATACACTCA TTGAGCAGGC GGAGCAGGGC GTCGATTATT TTACCATCCA TGCCGGTGTG CTGCTGCGTT ATATCCCGCT GACGGCGAAT CGTCTTACCG GCATCGTGTC GCGCGGTGGT TCCATCATGG CCAAATGGTG CCTCGCGCAC CACCAGGAGA GCTTTCTCTA CACCCATTTT GAAGAAATCT GCGAGATCAT GAAGGCCTAC GACGTGAGCT TCTCCCTCGG CGATGGTCTG CGTCCCGGCT CTCTGGCCGA CGCCAATGAC GAGGCGCAGT TCGCCGAGCT GCATACCCTG GGTGAACTCA CCCGGATTGC CTGGAAGCAC GATGTGCAGG TCATGATCGA AGGCCCCGGC CATGTCCCCA TGCAACTCAT CAAGGCTAAT ATGGAGGAGG AGCTACAGCA CTGTTTCGAG GCGCCGTTCT ACACGCTCGG ACCGCTGACC ACGGATATTG CCCCCGGCTA TGACCATATT ACCAGCGCCA TCGGCGCCGC GCAGATCGGC TGGTACGGGA CCGCCATGCT CTGCTACGTC ACCCCCAAGG AGCATCTCGG CCTGCCGGAT AAAAATGACG TGCGGGAAGG GGCCATCACC TACAAGATTG CCGCCCATGC CGCCGACCTG GCCAAGGGGC ATCCCGGCGC ACAAGTGCGG GATAACGCCC TGTCCAAGGC GCGTTTTGAG TTCCGCTGGG AAGACCAGTT TCACCTCGGA CTGGACCCCG AAAAGGCGCG GGAATATCAC GACGAGACCT TACCCCAGGA AGGCGCCAAG GCGGCGCACT TCTGTTCCAT GTGCGGTCCC CATTTCTGCT CCATGAAAAT CTCCCAGGAT TTGCAGGAAT ACGCGCAATC CAAGGGTGAA GATATCGAGA CGGCACGACT GGAAGGCCTG CAGGAAAAGG CAGAGGATTT CAAGCGGCTG GGGAAGAATA TCTACCTTAG ATAA
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Protein sequence | MATRPTDMVN TMQDAAVTCG PIPGSHKRYL GGVRFPELRI PLREIRQSDS RKRDGSLEVN PAIPVYDCSG PYTDPDVVID IHAGLPAMRW QWSPTDTAIE SRPEPGSAYG RARLADVRTA DLRFHHRREI RRAANGGNVS QMHYARRGII TPEMEFVAIR ENQGLEHLRA SHPALFRAHR GESFGAQIPD TITPEFVRDE IARGRAIIPA NINHPELEPM IIGRNFLVKI NANIGNSAVT SSIAEEVEKM VWSIRWGADT VMDLSTGRHI HETREWIIRN SPVPIGTVPI YQALEKVDGK AEDLTWDLFR DTLIEQAEQG VDYFTIHAGV LLRYIPLTAN RLTGIVSRGG SIMAKWCLAH HQESFLYTHF EEICEIMKAY DVSFSLGDGL RPGSLADAND EAQFAELHTL GELTRIAWKH DVQVMIEGPG HVPMQLIKAN MEEELQHCFE APFYTLGPLT TDIAPGYDHI TSAIGAAQIG WYGTAMLCYV TPKEHLGLPD KNDVREGAIT YKIAAHAADL AKGHPGAQVR DNALSKARFE FRWEDQFHLG LDPEKAREYH DETLPQEGAK AAHFCSMCGP HFCSMKISQD LQEYAQSKGE DIETARLEGL QEKAEDFKRL GKNIYLR
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