Gene Lferr_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0993 
Symbol 
ID6876961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp966006 
End bp966392 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content59% 
IMG OID642788874 
ProductGroup II intron maturase-specific domain protein 
Protein accessionYP_002219446 
Protein GI198283125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000582323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCGACA AGGCCATCGC AAAGCTGAAG AACCGGGTGC GGGAACTGAC CCGTCGTACG 
CGAGGCAACA ACATTGGCGT TATCGTGGCA GATCTGAGGA AAGTCCTGCT TGGTTGGAAA
GCGTATTTCG GCATTGCCGA GGTACTGAGC CCTCTGCGCG ACATCGACAA GTGGGTACGA
CGCAAGTTAC GTTACTATCT CTGGAAACAA TGGGGGCCGG CGGGCTACAG GGAACTACGC
AAGCGCGGCG TGTCTGTGCG CGAAGCGTGG AATACCAGTA AGTCGGCACA CGGTCCATGG
CGGCCGTCGA AGACGCCGGC ATTGGCTATT GCGCTACCAT GGCGCTACCT CAATAACTTG
GGACTACCCA GCCTTGCGGC CCGGTAA
 
Protein sequence
MADKAIAKLK NRVRELTRRT RGNNIGVIVA DLRKVLLGWK AYFGIAEVLS PLRDIDKWVR 
RKLRYYLWKQ WGPAGYRELR KRGVSVREAW NTSKSAHGPW RPSKTPALAI ALPWRYLNNL
GLPSLAAR