Gene Lferr_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0972 
Symbol 
ID6876938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp946622 
End bp947671 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content56% 
IMG OID642788851 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_002219425 
Protein GI198283104 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.119955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CAAAAGCCTA CGCTGCTCAG ACTGCTCGCA GTCCGTTGGC GCCCTACGAA 
GTCCTGCGTC GTGAGCCGGG TCCTGATGAT GTCCAGATAG ATATACTCTT TTGCGGTGTC
TGCCATTCCG ATTTGCACAC CGCCCGCAAT GAGTGGAAAA ACACGCTGTA TCCCACTGTT
CCAGGTCACG AAATCGTGGG TCGTGTCGTT GCCGTCGGTA AGGATGTCAA AAATTTTAGC
GTTGGTGATT TTGCCGGTGT CGGTTGCATG GTGGACAGTT GTGGGCACTG TCCGTCCTGT
GCCGAGGGTG AGGAGCAGTA CTGCGATAAC GGATTCACCG GAACCTACAA CGGCCCGGTC
TTCGGCGGCG AAAATACCTA CGGTGGCTAT TCCCAGAGCG TGGTGGTCAA AGAATCCTTT
GTGCTGAAGA TTCAGCATGA TGAAAAAGAT CTGGCGAGTG TGGCACCACT GCTCTGCGCC
GGTATCACCA CGTACTCGCC CTTACGCCAT TGGGGTGCCG GACCGGGTAA AAAGGTCGGC
ATTGTGGGTT TGGGCGGCCT TGGTCATATG GGCGTCAGGT TGGCGCACGC CATGGGCGCC
CATGTGGTGC TGTTCACCAC CTCTCCCGGC AAAGTGGAGG ATGGTAAGCG GCTGGGGGCG
GATGAGGTCT GCATCTCCAG AGATGACGCG CAAATGGCCA GCCATGCCAA CAGCTTCGAT
TTTATCCTCA ATACGGTGGC GGCGTCCCAT AACCTGGACG CCTTCCTGAA TCTGCTCAAG
CGGGATGGTA CGATGACGCT GGTGGGTGCG CCGGCAGAGC CCCATCCGTC ACCAGAAGTC
TTCAACCTGA TTTTTAAGCG CCGGCAGCTC GCGGGCTCCC TTATCGGTGG TATTCGGGAA
ACGCAGGAAA TGCTGGATTT CTGCGCGCAG CACGGGATTG GTTCGGATAT CGAGATGATC
CCCATGGACT ACATCAATAC CGCCTACGAA AGAATGCTGA AGAGCGATGT GAAGTATCGC
TTTGTGATTG ACATGGCGAC GCTGAAATAG
 
Protein sequence
MIKTKAYAAQ TARSPLAPYE VLRREPGPDD VQIDILFCGV CHSDLHTARN EWKNTLYPTV 
PGHEIVGRVV AVGKDVKNFS VGDFAGVGCM VDSCGHCPSC AEGEEQYCDN GFTGTYNGPV
FGGENTYGGY SQSVVVKESF VLKIQHDEKD LASVAPLLCA GITTYSPLRH WGAGPGKKVG
IVGLGGLGHM GVRLAHAMGA HVVLFTTSPG KVEDGKRLGA DEVCISRDDA QMASHANSFD
FILNTVAASH NLDAFLNLLK RDGTMTLVGA PAEPHPSPEV FNLIFKRRQL AGSLIGGIRE
TQEMLDFCAQ HGIGSDIEMI PMDYINTAYE RMLKSDVKYR FVIDMATLK