Gene Lferr_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0917 
Symbol 
ID6876882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp880200 
End bp881228 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content53% 
IMG OID642788797 
ProductPurine nucleoside permease-like protein 
Protein accessionYP_002219372 
Protein GI198283051 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG5042] Purine nucleoside permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.155546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT CACCAGGGAG AATGCTCGTG AAGAAAAACA CGGTTTGGAA GCATACGATG 
TTGTATGGTG CGGTCGGCTT CTCATTGATG ACGCCGCTGG CCTACGCCCA GGCTATACCG
GCGGCGGCGA AAATGCGTCC GAAAGTGATC GTGCTGACAG CATTTCCGCC AGAATGGCAA
GCATGGACGG TGGAAAAATC TTTTCAGCAT CAGGTGTTGC ATGTGCCAGG TCTCATCAAG
CCCCTGATCT GCGACAGTAA AGACGTCTGC GTTACGGAAA CCGGGGAGGG GGAAATCAAC
GCCGCAGTCA CCGTCACCAG TCTGGTGAAA GACGCGGCTC TGGATGTGAA GAAGACCATT
TTTATTCGTA GCGGCATTGC CGGCGGTGTG GACGAAGAGA ACTCCGCATT GGGCAGTGTG
TATATCAATA ATTGGGTAAT CTCCTGGGCT TTTGGACATC ATTACCTGAG TGATCAAAAG
CAGTTGGCAT GGTCCCCCCC GGGCTGCACA GATTATGCCA CGCCAGGCCA CTGCGGAAAT
TACACTCGGA ATATCATGGA AAATCTGGCA TATAAAATCA ATCCGGCACT GCTGAACATG
GCGGTAAATG CCTCGGCCCA TGTCGCGCTG GAAAACTCAA CAGAAGCGAA GAAACTGGAT
AAAACGTTCG CTATCTCTGC GGTGCCGAAG GTGATGGTGG GCGCCACTAT CACCGGCAAT
GATTTCTGGA TCGGTAAAGC GAATCAGGCC ATTGCCGAAC AGATTGTGCG TCGCTATACC
CATGGAGAGG CGAAATATAC CAATACTGCC ATGGAGGATC TCGGGGATGT GGCCGCGCTT
TCGCGTTTTG GTTTGGCGGA TCATTATCTG TCCATCCGGG GCATCTCTGA CGTGGATGTT
CCGCCCCCCG GTAAAACCGA AGAGGAAATC TGGAAAACAG GCGATTTATA TGCCAGCGCT
CTCGCCGAGC GTAATGCCGT GATCGTCACC GAGGCCGTTA TCGCACACCT GTTAAAGGGC
ACTGCATGA
 
Protein sequence
MKNSPGRMLV KKNTVWKHTM LYGAVGFSLM TPLAYAQAIP AAAKMRPKVI VLTAFPPEWQ 
AWTVEKSFQH QVLHVPGLIK PLICDSKDVC VTETGEGEIN AAVTVTSLVK DAALDVKKTI
FIRSGIAGGV DEENSALGSV YINNWVISWA FGHHYLSDQK QLAWSPPGCT DYATPGHCGN
YTRNIMENLA YKINPALLNM AVNASAHVAL ENSTEAKKLD KTFAISAVPK VMVGATITGN
DFWIGKANQA IAEQIVRRYT HGEAKYTNTA MEDLGDVAAL SRFGLADHYL SIRGISDVDV
PPPGKTEEEI WKTGDLYASA LAERNAVIVT EAVIAHLLKG TA