Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0917 |
Symbol | |
ID | 6876882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 880200 |
End bp | 881228 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642788797 |
Product | Purine nucleoside permease-like protein |
Protein accession | YP_002219372 |
Protein GI | 198283051 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG5042] Purine nucleoside permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.155546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACT CACCAGGGAG AATGCTCGTG AAGAAAAACA CGGTTTGGAA GCATACGATG TTGTATGGTG CGGTCGGCTT CTCATTGATG ACGCCGCTGG CCTACGCCCA GGCTATACCG GCGGCGGCGA AAATGCGTCC GAAAGTGATC GTGCTGACAG CATTTCCGCC AGAATGGCAA GCATGGACGG TGGAAAAATC TTTTCAGCAT CAGGTGTTGC ATGTGCCAGG TCTCATCAAG CCCCTGATCT GCGACAGTAA AGACGTCTGC GTTACGGAAA CCGGGGAGGG GGAAATCAAC GCCGCAGTCA CCGTCACCAG TCTGGTGAAA GACGCGGCTC TGGATGTGAA GAAGACCATT TTTATTCGTA GCGGCATTGC CGGCGGTGTG GACGAAGAGA ACTCCGCATT GGGCAGTGTG TATATCAATA ATTGGGTAAT CTCCTGGGCT TTTGGACATC ATTACCTGAG TGATCAAAAG CAGTTGGCAT GGTCCCCCCC GGGCTGCACA GATTATGCCA CGCCAGGCCA CTGCGGAAAT TACACTCGGA ATATCATGGA AAATCTGGCA TATAAAATCA ATCCGGCACT GCTGAACATG GCGGTAAATG CCTCGGCCCA TGTCGCGCTG GAAAACTCAA CAGAAGCGAA GAAACTGGAT AAAACGTTCG CTATCTCTGC GGTGCCGAAG GTGATGGTGG GCGCCACTAT CACCGGCAAT GATTTCTGGA TCGGTAAAGC GAATCAGGCC ATTGCCGAAC AGATTGTGCG TCGCTATACC CATGGAGAGG CGAAATATAC CAATACTGCC ATGGAGGATC TCGGGGATGT GGCCGCGCTT TCGCGTTTTG GTTTGGCGGA TCATTATCTG TCCATCCGGG GCATCTCTGA CGTGGATGTT CCGCCCCCCG GTAAAACCGA AGAGGAAATC TGGAAAACAG GCGATTTATA TGCCAGCGCT CTCGCCGAGC GTAATGCCGT GATCGTCACC GAGGCCGTTA TCGCACACCT GTTAAAGGGC ACTGCATGA
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Protein sequence | MKNSPGRMLV KKNTVWKHTM LYGAVGFSLM TPLAYAQAIP AAAKMRPKVI VLTAFPPEWQ AWTVEKSFQH QVLHVPGLIK PLICDSKDVC VTETGEGEIN AAVTVTSLVK DAALDVKKTI FIRSGIAGGV DEENSALGSV YINNWVISWA FGHHYLSDQK QLAWSPPGCT DYATPGHCGN YTRNIMENLA YKINPALLNM AVNASAHVAL ENSTEAKKLD KTFAISAVPK VMVGATITGN DFWIGKANQA IAEQIVRRYT HGEAKYTNTA MEDLGDVAAL SRFGLADHYL SIRGISDVDV PPPGKTEEEI WKTGDLYASA LAERNAVIVT EAVIAHLLKG TA
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