| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0909 |
|---|
| Symbol | |
|---|
| ID | 6876874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 872866 |
|---|
| End bp | 873672 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642788790 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002219365 |
|---|
| Protein GI | 198283044 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACGA GCATGAACAT CGTCTGGCTT TATTTGTTTT CCGGAGCAGT CGCGGGCATA
ATTTCAGGAA TGCTAGGAGT TGGCGGCGGG ATCGTCCTGG TCCCTATCCT GATTTTTATC
TTTGGTGTTC TCGCCATACC CGTAGGCATG GCAGCACATA TGGCAATCGG GACGTCCCTG
TCAACAATTA TATTTACCTC CATGTCGGCA ATACATGCTC AGCACAGACG AAAAGCAATT
GACTGGAATC TGGTCAGAAA GCTTGCTCCG GCGACCATTC TCGGGAGCCT CATCAGCGGT
TATCTGGCAG GGCTGATTCC CGGACAGGCA TTGAAAGCAA TATTCGGCGT ATTTTTAGCG
GCGGCGGCGG TGCAAATGTT TTTTGAATGG CGGCCGGCGC CCTATCGTAC CCTGCCTGGC
CCCTTGGCCC TTTTGGGCAT TGGTACGGGT ATTGGTGCGC TCTCCGCGAT GTTGGGGATT
GGCGGTGGCA CGCTCACGGT TCCATTCTTC AATTGGTGTA ACGTGGACTT GCGTCGGGCC
ATAGCCACGT CAACGACTTT GGGGTTTGGG CTGGCGATCT TTGGCACCAT TGGTTTCATT
GTATCCGGAT TTCAGCGGCC CGGATTGCCG TCGGCCAGTT TTGGCTATGT TTCCTTGCCG
GCTATGCTGG GAATAGCGAG TACCGCAGTG CTATTCGCGC CGTTTGGCGT TCATTTATCA
TATCGTCTTC CCGTGCGCCG ACTCAAACGC ATATTCGCTT TGCTCCTCCT CTGCCTTGCG
TTTAATATAC TCCTGAATTT CATATAG
|
|---|
| Protein sequence | MGTSMNIVWL YLFSGAVAGI ISGMLGVGGG IVLVPILIFI FGVLAIPVGM AAHMAIGTSL
STIIFTSMSA IHAQHRRKAI DWNLVRKLAP ATILGSLISG YLAGLIPGQA LKAIFGVFLA
AAAVQMFFEW RPAPYRTLPG PLALLGIGTG IGALSAMLGI GGGTLTVPFF NWCNVDLRRA
IATSTTLGFG LAIFGTIGFI VSGFQRPGLP SASFGYVSLP AMLGIASTAV LFAPFGVHLS
YRLPVRRLKR IFALLLLCLA FNILLNFI
|
|---|
| |