Gene Lferr_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0862 
Symbol 
ID6876827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp819580 
End bp820278 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content61% 
IMG OID642788744 
Productphosphoheptose isomerase 
Protein accessionYP_002219319 
Protein GI198282998 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.296003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATC CTCTGCAGGA GCTCTATCCT TTTCTGCACG GTCAAGCCAA AAATCCGCAG 
CGGGAAAAGA TGGCGCTGCT GGAGTCTGTG CGGCAGAAAT CCGCCGAAAG CCGGAACGTC
AAGGCGCAGT TTTTTGCCGC GCATGCGGAG GCGCTGGTTT CCATGGCGGC GGCCCTGGCT
GCGGTTTATC AGAGAGGCGG CATGCTCTAC ACCATGGGTA ACGGCGGCTC CTCCTGTGAT
GCGGACCACT TGGCGGTGGA GTTCATGCAT CCCGTTACCA CGGGCCGCCC GGCCCTGGCG
GCGCACAGTC TGGTGAGTGA CCGGGCCATG CTGACCGCTG TCGGTAATGA CGTGGGTTTT
CAGCATGTGT TTTTACGGCA ACTGACGGCC CTGGCAAGAT CGGGGGATGC GCTGTTCGGC
TTTTCGACCA GTGGCAACTC CGCCAATCTC ATGGCCGCCT ACCGGAAGGC CCGGGAAACC
GGCATGGTGA CCTTCGGCCT TGCCGGCATG CAGGGGGGTG AGATGCAGGC AAGCGGCTTG
GTGGACCACC TCTTGGTGGT GGCGACGGAC AGCATCCACC GTATCCAGGA ATGCCACGTC
ACGACCTTTC ACATACTCTG GGACCTGGTG CATACCATCC TGGCAGACCG GCGCGGAGAC
TTGCGGGCGG AGGTAACCGA AGATGCGTTA CGTGGATGA
 
Protein sequence
MMDPLQELYP FLHGQAKNPQ REKMALLESV RQKSAESRNV KAQFFAAHAE ALVSMAAALA 
AVYQRGGMLY TMGNGGSSCD ADHLAVEFMH PVTTGRPALA AHSLVSDRAM LTAVGNDVGF
QHVFLRQLTA LARSGDALFG FSTSGNSANL MAAYRKARET GMVTFGLAGM QGGEMQASGL
VDHLLVVATD SIHRIQECHV TTFHILWDLV HTILADRRGD LRAEVTEDAL RG