| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0841 |
|---|
| Symbol | |
|---|
| ID | 6876806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 798850 |
|---|
| End bp | 801126 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788723 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_002219298 |
|---|
| Protein GI | 198282977 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.203079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCGT TCAAGATCAC CCATTACCAA CAACCGGCGG GAGGTTGGGG ATCCCTGCGT
GCCTCGCTGC GCAGCTTGCG TCAGGAACAC GCGCTGACGG ACGGTGCCGC CCTGCTCCTC
AAAATGAATC AGGCGGAAGG TTTTGATTGT CCGGGTTGCG CCTGGGGAGA TCCCGAGGCG
CATTCCAGTT TCGAGTTCTG TGAGAATGGG GTCAAGGCCG TCGCCGCCGA AGCTACCGGC
AAACGGGTGA CCGCGGATTT TTTTGCAGCG CACACCCTGT CCTGGCTGGC GGAGCAAACG
GACTATTTTC TGGAAGAGCA GGGGCGTCTG ACCGAGCCCA TGGCTTACGA TCCGCAGAGT
GACCGCTACG TACCCGTCAG CTGGGATACC GCCTTTGCGC GGATCGCCGC GCAACTCAAT
GCCCTGGCAT CCCCCGACGA GGCCATATTT TACACGTCTG GGCGTACCTC CAATGAAGCC
GCATTTTTAT ATCAGCTCTT TGTGCGGGAA TTCGGTACCA ATAATCTCCC CGACTGTTCC
AACATGTGTC ATGAGCCAAC CAGCCTGGCC ATGCCCGAAT CCATCGGGGT AGGTAAGGCC
ATGGTAACCC TGGATGATTT TGAACTGACC GATACCATCC TGATGTTCGG TCATAATCCT
GGGACCTGTG CCCCACGTAT GTTGGCGACG CTGAGCGAGG CATCCAAAAG GGGTGCGCGT
ATCCTGGTCT TCAACCCCTT GCATGAACGC GGACTGGAGC GATTCCTGCA TCCCCAACAT
CCGGTGGAGA TGCTCACCAA TCACGCCACC CCCATCGCCA GCCACTACTA CCAGCCCCGG
AGCGGTGGCG ATTACGCCAT TGCCATGGGG ATTGCCCGCA CCATCCTGGA GTCCGGGAAC
CCCGATCAGG CGTTTATCGA GGAGCATACC CAGGGGTTTG ACGGTTTCCG CGATCTGGTC
ATGAACACGC CTTGGACACA GATCGAGGAA CAGAGCGGCC TCAGCCGCCA CGATCTGGAG
GAGATCGGGC GCATCTATGA TCAGGGACAG GCCGCCATAT TTACGTGGGG AATGGGCATT
ACCCAGCAAA AGCACGCGGT GGCCACCATC CAGATGTTCC TGAACGTGCT GCTGCTCAAG
GGTAATATCG GCAAACCTGG CGCCGGGCCC TCGCCGATTC GCGGTCACAG CAATGTGCAG
GGTGACCGGA CCATGGGGAT ATATGAGAAA CCTTCCCCGG AGTTTCTGCA ACGCCTCGGG
GCGGAGTTCC ATTTTGCGCC GCCGCGGCAG CATGGCTACG ATACGGTAGC CAGCATCGAA
GCGATGGAGG ATGGGCGAGC CAAGTTCTTT TTCGGGCTGG GTGGCAATTT TGCCAACGCC
ACACCCGACA CGGCGCGCGC CCACGCAGCG CTCCGGCGCT GCGCGATGAC GGTACATGTG
ACCACCAAAC TCAACCGGTC CCACATCGTC CACGGCGAAC AGTCCTTGAT TTTACCCTGC
CTGGGACGCA CGGAGATCGA CATCCAAAAA ACTGGCCCCC AAGGCGTGAC GGTGGAGGAC
ACCTTCTGCA TGGTGCACAT CTCCCAGGGG ATGAACGAGC CGGCCTCCCC TTCCCTGCTG
TCGGAATGTG CCATCGTGGC GCGTCTGGCG CGGGCGACCC TGCCGCTCAG CCCCACCCCG
TGGCTGCAAC TCATGGGGGA CTATGACCTC ATTCGCGACC GCATTGCGCG CGTGGTGCCG
GGTTTCGAGC ATTTCAACGA ACGGGTCCAT AAACCACGGG GTTTTCATCT GGATCTGCCA
CCCCGTTCAC GGGTATGGCC CACTGCCAGC GGCAAGGCCA ATTTTCTGGC CAAGGCGCTG
TCCACCATCG CCGACGACCA TTTTGTGCCG CAGACCTCCG AAAAGCTCTT CACCCTGATG
ACGATTCGCA GCCACGATCA GTACAACACC ACGATTTATG GTTACGAGGA CCGTTATCGC
GGCGTATCCG GCCTGCGCAA CGTGTGTTTC ATGCATCCGG AGGATATTCG GGACATGGGT
TTTCAGGCCA ATGACTGGGT GGACATCACC TCGCACTGGA CAGACGGTGA ACGTGTGGCT
CGAGACTTCC TGCTGGTTGC GTTCGATATT CCCAAAGGGA TGCTCGCGGG TTATTACCCG
GAATTGAACG TATTGGTGCC CTTGTCCAGC TACGCTGATC GCGCCCGCAC GCCGACGTCC
AAATCGATCC CGGTGACCCT GGCGCGGACA AAGGGAGGCG AACACCATGT CGCCTGA
|
|---|
| Protein sequence | MSSFKITHYQ QPAGGWGSLR ASLRSLRQEH ALTDGAALLL KMNQAEGFDC PGCAWGDPEA
HSSFEFCENG VKAVAAEATG KRVTADFFAA HTLSWLAEQT DYFLEEQGRL TEPMAYDPQS
DRYVPVSWDT AFARIAAQLN ALASPDEAIF YTSGRTSNEA AFLYQLFVRE FGTNNLPDCS
NMCHEPTSLA MPESIGVGKA MVTLDDFELT DTILMFGHNP GTCAPRMLAT LSEASKRGAR
ILVFNPLHER GLERFLHPQH PVEMLTNHAT PIASHYYQPR SGGDYAIAMG IARTILESGN
PDQAFIEEHT QGFDGFRDLV MNTPWTQIEE QSGLSRHDLE EIGRIYDQGQ AAIFTWGMGI
TQQKHAVATI QMFLNVLLLK GNIGKPGAGP SPIRGHSNVQ GDRTMGIYEK PSPEFLQRLG
AEFHFAPPRQ HGYDTVASIE AMEDGRAKFF FGLGGNFANA TPDTARAHAA LRRCAMTVHV
TTKLNRSHIV HGEQSLILPC LGRTEIDIQK TGPQGVTVED TFCMVHISQG MNEPASPSLL
SECAIVARLA RATLPLSPTP WLQLMGDYDL IRDRIARVVP GFEHFNERVH KPRGFHLDLP
PRSRVWPTAS GKANFLAKAL STIADDHFVP QTSEKLFTLM TIRSHDQYNT TIYGYEDRYR
GVSGLRNVCF MHPEDIRDMG FQANDWVDIT SHWTDGERVA RDFLLVAFDI PKGMLAGYYP
ELNVLVPLSS YADRARTPTS KSIPVTLART KGGEHHVA
|
|---|
| |