Gene Lferr_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0810 
Symbol 
ID6876775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp770374 
End bp771429 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID642788692 
Productprotein of unknown function UPF0118 
Protein accessionYP_002219267 
Protein GI198282946 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG CGGATCTGAC GGTTCGCGAT CTGCGATTCG CCTTCGGCCA ACTGCTCGCC 
GCCGTTCTGT TTTTTGCTCT TGTCTGGAAA ATTCTTTCCC CCTTTTTGCC AGCCCTTGGC
TGGGCTGCCA TTCTCGTTTA TGCGACCTGG CCGCTGGCTG GTCCCATGCG CCGACATTGG
CCGCCGGTGC CGGCGGCAGC AGGCGCCACG CTCATGTTGG CGCTGATTTT TATTCTTCCC
GTAATTTTCC TGAGCATCAG CCTGGGGACG GAGTTGCACC ATGTACTGAC CGATCTCGGT
AGCGTGGATG CACACACGAC CCTGGAAGCA AGTCTGAATC GGATACCTTG GCTGCATGAA
CTGCTCGCGC AGATTCCTGC AGCCTGGAAG ACGAAACTGA TGCCCGGTGC CCTGACCCCC
GACCTGTCCG CCTGGGCGGG GCGGCTGGGT AGTGTTGCGG GTGGAATCGG TCGTTTCGGT
ACTTTGCTTA TACTTGTTCT CATCACCGCC TTTTTCTTCT ACCGGCATGG TGAAGTGCTG
GTGGACCAGT TGCGCCGTTT TGTCGGCCAG GTGCTGGGAC AGCGCGGCGA TGCTTATCTG
CGGACGGTGG CCAGCACCAT CCGTGCGGTG ATTTATGGCA TTCTGGCGAC CGCGGTGGCG
CAGGGGGCGC TGGCGGGATT GGGTTACTGG GTGGCGGGAC TGCCCGCACC CGTACTGCTG
GCCATCGTCA CCCTGCTGTT TTCCTTTATC CCCTTCGGTA CCCCGCTGGT CTGGGGGGCA
GCGAGCATCT GGTTGCTATC TCAGGGCGAG ATTTGGGCGG GAGTGGGCCT GGCCCTGTGG
GGTACGCTGG TGGTGAGCTG GATCGACAAC CTGATCCGCC CGCTGGTGAT TTCCAATGCG
GTACGGATTC CATTTCTGCT GGTTCTATTC GGGGTGCTGG GCGGTATTCT CGCCTTCGGT
TTCCTCGGTT TGTTTCTGGG GCCGGTGCTG CTGGCCGTGC TGTTGGCGAT CTGGAGTGAG
TGGTTGCGGC CAGCGCCTGC TGCGCCGCAG GGTTGA
 
Protein sequence
MRLADLTVRD LRFAFGQLLA AVLFFALVWK ILSPFLPALG WAAILVYATW PLAGPMRRHW 
PPVPAAAGAT LMLALIFILP VIFLSISLGT ELHHVLTDLG SVDAHTTLEA SLNRIPWLHE
LLAQIPAAWK TKLMPGALTP DLSAWAGRLG SVAGGIGRFG TLLILVLITA FFFYRHGEVL
VDQLRRFVGQ VLGQRGDAYL RTVASTIRAV IYGILATAVA QGALAGLGYW VAGLPAPVLL
AIVTLLFSFI PFGTPLVWGA ASIWLLSQGE IWAGVGLALW GTLVVSWIDN LIRPLVISNA
VRIPFLLVLF GVLGGILAFG FLGLFLGPVL LAVLLAIWSE WLRPAPAAPQ G