Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0765 |
Symbol | |
ID | 6876729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 724549 |
End bp | 725967 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788646 |
Product | glycosyl transferase-like protein |
Protein accession | YP_002219222 |
Protein GI | 198282901 |
COG category | [R] General function prediction only |
COG ID | [COG4671] Predicted glycosyl transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.51798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCC TCATACAGCC GGGAATGGAG CGATACCGCC GCCTGCCCGG TGCGCAGGCG GCGGGTCCCA TGCCCACTAG CCAACGCTAC GCGGACCGGG AAAGCCGGCA GAACCTGATG TTTGCCGGTG ATTCCCCTTC CTCCCCCGGG ACTTTCGCAG CAACGGGGCA GCCGATAACC CCGGGCGCCT TGCACCAGTG GTCCGCCGCA AAGCATGAGC GGTCGGCGCG ACGAGTACTC CTCTATTCTC ATGACACCTT CGGACTTGGC CATTTACGGC GGAATCTGGC CATTGTCGAG CATCTCATGC AGCGTAAACC GCCTTTTTCC GGGATGCTGC TGACCGGTTC CCCCATGGCC GGTTCCTGGC CGATGCCGAT CGGCCTGGAG GTACGAGCCA TCCCTCCCGT CATCAAGGTT GGTGCCGAGG AATATGCGGC CAGGGATCTT TCCTCCAGCT TCGAGATGGT CAAGGCACAA CGCGAGGCGG CGATTCTGGA CGCCATTGCC TCCTACCGGC CCGACTTCTT CCTGGTCGAT CATGCCCCGG CGGGAATGAA AGGGGAGCTT TTGTCGGCAC TGCGGTTCAT CCGCGAGGAG ATGCCGGCGA CTCGCACCGT GTTGGGGTTG AGAGATGTCA TCGACAGCCC TGAGACCGTG CGCCAGGTTT GGCAGGCACA AGGCATCTAC GAGTTGCTGG AAAGGGAATA TGACCAGATC CTGGTTTACG GCAGTCGCCA CCTGTTCGAC GTGGTGAGTG CCTATAAGCT TTCACCGAAG GTGGCGGCCA AAGTGCGCTA CTGCGGTTAT GTCGCCCGCA CGGGCCTGCA CGGTGTTCCG GACGTGCTGA TGGCACCGTC GGGTTTGCCG GTGGTTCTCG TTACCGTCGG CGGCGGCGGC GATGGGTATG CCTTGATTGA TGCCTATCTT GAGGCCTTGC GTCGGATTCC ACAGAACACG GTACACAGCA TCGTCGTTCC CGGGCCGCTC ATGCCGCCGG ACCAGTATCA GACGCTGGCC GGGATTGCTG CTCAGCGCCA GGACATCCAG ATTATCCCCT ATACCACCGA ACTCGTGGGC TTGCTGCACA TTGCCGATCT GGTGGTGGCG ATGGGAGGGT ACAACACCAC CGCCGAGATC CTCGCCGCCA GGAAGTCGGC CATCCTGGTG CCACGCTCGA CCCCGCGCAT GGAGCAATGG CTTCGCGCAA CGACGTTGAG CCAGCTCGGG CTCGTGTGGA TGATCCAGCC CGAGGAAGAC CTGGTCGACC GACTGGTGGA GCTGGTGCCG GCCGCCGTTG CCGGCGACCG TCCGCCTGGA AAGCCATGGG ATACCGTGGA CCTGGGGGGC GTTCATCGTG TTGCCGAGGT ACTGGAAGAG ATGCTCCATC CCGGCGCGAG CACGGAGGTA TCCCTATGA
|
Protein sequence | MKPLIQPGME RYRRLPGAQA AGPMPTSQRY ADRESRQNLM FAGDSPSSPG TFAATGQPIT PGALHQWSAA KHERSARRVL LYSHDTFGLG HLRRNLAIVE HLMQRKPPFS GMLLTGSPMA GSWPMPIGLE VRAIPPVIKV GAEEYAARDL SSSFEMVKAQ REAAILDAIA SYRPDFFLVD HAPAGMKGEL LSALRFIREE MPATRTVLGL RDVIDSPETV RQVWQAQGIY ELLEREYDQI LVYGSRHLFD VVSAYKLSPK VAAKVRYCGY VARTGLHGVP DVLMAPSGLP VVLVTVGGGG DGYALIDAYL EALRRIPQNT VHSIVVPGPL MPPDQYQTLA GIAAQRQDIQ IIPYTTELVG LLHIADLVVA MGGYNTTAEI LAARKSAILV PRSTPRMEQW LRATTLSQLG LVWMIQPEED LVDRLVELVP AAVAGDRPPG KPWDTVDLGG VHRVAEVLEE MLHPGASTEV SL
|
| |