Gene Lferr_0765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0765 
Symbol 
ID6876729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp724549 
End bp725967 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content63% 
IMG OID642788646 
Productglycosyl transferase-like protein 
Protein accessionYP_002219222 
Protein GI198282901 
COG category[R] General function prediction only 
COG ID[COG4671] Predicted glycosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.51798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC TCATACAGCC GGGAATGGAG CGATACCGCC GCCTGCCCGG TGCGCAGGCG 
GCGGGTCCCA TGCCCACTAG CCAACGCTAC GCGGACCGGG AAAGCCGGCA GAACCTGATG
TTTGCCGGTG ATTCCCCTTC CTCCCCCGGG ACTTTCGCAG CAACGGGGCA GCCGATAACC
CCGGGCGCCT TGCACCAGTG GTCCGCCGCA AAGCATGAGC GGTCGGCGCG ACGAGTACTC
CTCTATTCTC ATGACACCTT CGGACTTGGC CATTTACGGC GGAATCTGGC CATTGTCGAG
CATCTCATGC AGCGTAAACC GCCTTTTTCC GGGATGCTGC TGACCGGTTC CCCCATGGCC
GGTTCCTGGC CGATGCCGAT CGGCCTGGAG GTACGAGCCA TCCCTCCCGT CATCAAGGTT
GGTGCCGAGG AATATGCGGC CAGGGATCTT TCCTCCAGCT TCGAGATGGT CAAGGCACAA
CGCGAGGCGG CGATTCTGGA CGCCATTGCC TCCTACCGGC CCGACTTCTT CCTGGTCGAT
CATGCCCCGG CGGGAATGAA AGGGGAGCTT TTGTCGGCAC TGCGGTTCAT CCGCGAGGAG
ATGCCGGCGA CTCGCACCGT GTTGGGGTTG AGAGATGTCA TCGACAGCCC TGAGACCGTG
CGCCAGGTTT GGCAGGCACA AGGCATCTAC GAGTTGCTGG AAAGGGAATA TGACCAGATC
CTGGTTTACG GCAGTCGCCA CCTGTTCGAC GTGGTGAGTG CCTATAAGCT TTCACCGAAG
GTGGCGGCCA AAGTGCGCTA CTGCGGTTAT GTCGCCCGCA CGGGCCTGCA CGGTGTTCCG
GACGTGCTGA TGGCACCGTC GGGTTTGCCG GTGGTTCTCG TTACCGTCGG CGGCGGCGGC
GATGGGTATG CCTTGATTGA TGCCTATCTT GAGGCCTTGC GTCGGATTCC ACAGAACACG
GTACACAGCA TCGTCGTTCC CGGGCCGCTC ATGCCGCCGG ACCAGTATCA GACGCTGGCC
GGGATTGCTG CTCAGCGCCA GGACATCCAG ATTATCCCCT ATACCACCGA ACTCGTGGGC
TTGCTGCACA TTGCCGATCT GGTGGTGGCG ATGGGAGGGT ACAACACCAC CGCCGAGATC
CTCGCCGCCA GGAAGTCGGC CATCCTGGTG CCACGCTCGA CCCCGCGCAT GGAGCAATGG
CTTCGCGCAA CGACGTTGAG CCAGCTCGGG CTCGTGTGGA TGATCCAGCC CGAGGAAGAC
CTGGTCGACC GACTGGTGGA GCTGGTGCCG GCCGCCGTTG CCGGCGACCG TCCGCCTGGA
AAGCCATGGG ATACCGTGGA CCTGGGGGGC GTTCATCGTG TTGCCGAGGT ACTGGAAGAG
ATGCTCCATC CCGGCGCGAG CACGGAGGTA TCCCTATGA
 
Protein sequence
MKPLIQPGME RYRRLPGAQA AGPMPTSQRY ADRESRQNLM FAGDSPSSPG TFAATGQPIT 
PGALHQWSAA KHERSARRVL LYSHDTFGLG HLRRNLAIVE HLMQRKPPFS GMLLTGSPMA
GSWPMPIGLE VRAIPPVIKV GAEEYAARDL SSSFEMVKAQ REAAILDAIA SYRPDFFLVD
HAPAGMKGEL LSALRFIREE MPATRTVLGL RDVIDSPETV RQVWQAQGIY ELLEREYDQI
LVYGSRHLFD VVSAYKLSPK VAAKVRYCGY VARTGLHGVP DVLMAPSGLP VVLVTVGGGG
DGYALIDAYL EALRRIPQNT VHSIVVPGPL MPPDQYQTLA GIAAQRQDIQ IIPYTTELVG
LLHIADLVVA MGGYNTTAEI LAARKSAILV PRSTPRMEQW LRATTLSQLG LVWMIQPEED
LVDRLVELVP AAVAGDRPPG KPWDTVDLGG VHRVAEVLEE MLHPGASTEV SL