Gene Lferr_0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0745 
Symbol 
ID6876709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp705976 
End bp706560 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID642788626 
ProductChorismate lyase 
Protein accessionYP_002219202 
Protein GI198282881 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00315898 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000132402 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCGTG ATCAAGAGGC ACAACATGCC GTATCCGTGT TGCGCAGGGG ATCGCTGCCG 
CACACCAGGA TGATGGCCGG CAAGCCCCCT GCCCTGCGCC ACGCTCCCCG CGCAATCTGG
CCCTGGCTCA TCCTGCCTGC CTCCCTCACC GCCGCTCTGC AACGGGCTTA TGGAAAACCG
CACACCGTGC GGGCGCTGCT GCTGGATAGC GGACGCGCGA ACCCCTCGCC GGTCGAGCGC
CGCATTTTGT GCATGCGCCG CGGCGAGCGG ATTTTCTGGC GCGAGGTGCT CCTGCACGGT
GGTGACCCGG CATACCCGGC ACTCTGGGCG CGCACCACCA TTCCTTTGCG AGGACTGCGC
CACGGTCTGT TACCTCTGAC CCGCCATGGC ACGCGCCCCA TCGGCAACAC CTTATTCCGC
CACCGCCGGT TGCGGCGCTC CCCGATTCAG GCCGACAGCC GGCCGCGGTT CGGCCCGCGG
CGCTGGCAGC GGCGCTCCGT ATTGCGGCGC GGCAGCGCAG GTGTGTTGGT AGAAGAGCAT
TTTCTGCCAG ATCTGCCCTG CTGGGCAGGG CGGGGACGAC GCTGA
 
Protein sequence
MLRDQEAQHA VSVLRRGSLP HTRMMAGKPP ALRHAPRAIW PWLILPASLT AALQRAYGKP 
HTVRALLLDS GRANPSPVER RILCMRRGER IFWREVLLHG GDPAYPALWA RTTIPLRGLR
HGLLPLTRHG TRPIGNTLFR HRRLRRSPIQ ADSRPRFGPR RWQRRSVLRR GSAGVLVEEH
FLPDLPCWAG RGRR