Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0745 |
Symbol | |
ID | 6876709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 705976 |
End bp | 706560 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642788626 |
Product | Chorismate lyase |
Protein accession | YP_002219202 |
Protein GI | 198282881 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00315898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000132402 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGCGTG ATCAAGAGGC ACAACATGCC GTATCCGTGT TGCGCAGGGG ATCGCTGCCG CACACCAGGA TGATGGCCGG CAAGCCCCCT GCCCTGCGCC ACGCTCCCCG CGCAATCTGG CCCTGGCTCA TCCTGCCTGC CTCCCTCACC GCCGCTCTGC AACGGGCTTA TGGAAAACCG CACACCGTGC GGGCGCTGCT GCTGGATAGC GGACGCGCGA ACCCCTCGCC GGTCGAGCGC CGCATTTTGT GCATGCGCCG CGGCGAGCGG ATTTTCTGGC GCGAGGTGCT CCTGCACGGT GGTGACCCGG CATACCCGGC ACTCTGGGCG CGCACCACCA TTCCTTTGCG AGGACTGCGC CACGGTCTGT TACCTCTGAC CCGCCATGGC ACGCGCCCCA TCGGCAACAC CTTATTCCGC CACCGCCGGT TGCGGCGCTC CCCGATTCAG GCCGACAGCC GGCCGCGGTT CGGCCCGCGG CGCTGGCAGC GGCGCTCCGT ATTGCGGCGC GGCAGCGCAG GTGTGTTGGT AGAAGAGCAT TTTCTGCCAG ATCTGCCCTG CTGGGCAGGG CGGGGACGAC GCTGA
|
Protein sequence | MLRDQEAQHA VSVLRRGSLP HTRMMAGKPP ALRHAPRAIW PWLILPASLT AALQRAYGKP HTVRALLLDS GRANPSPVER RILCMRRGER IFWREVLLHG GDPAYPALWA RTTIPLRGLR HGLLPLTRHG TRPIGNTLFR HRRLRRSPIQ ADSRPRFGPR RWQRRSVLRR GSAGVLVEEH FLPDLPCWAG RGRR
|
| |