Gene Lferr_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0627 
Symbol 
ID6876589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp586846 
End bp587415 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID642788510 
Producthypothetical protein 
Protein accessionYP_002219088 
Protein GI198282767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.195927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACA GGAAATCCCC TTTTACGTCT GGTAAAGGTG AATCAAAGCG TGCAGCAATG 
GCGGGAGCGT GTATTTTCCT GTCGGCCTTT CTGATCAGCA CTTCCGTGGA TGCATCAACC
ATTTATCGCT GGGTGGGCGG CGGTGGCGTA GTCAGCTACG GTGAAGCTCC GCCACCGGGT
GCCAAAGGCG TCGAACAGAT TTCCGGGGCG CCACAGGCTT CGGTCAGTAC GCCGATGCCT
GGGTCGGGGG TCGCCGGCGC CACATCGACG CCGGAACCAC CCGTGCCCGC GCCAGCCGCC
CGGCCTGCGG CCAACCCCGC ATTGAAGCGC CTGCAGGGGG AATTGCTCGC GGCGCGGCTG
ACCCTGATCC AGGCGACAAA AAACTATGAG CAGGGCAAGG CCATCCGCAC CGGAAACGAG
CGTAATTATG CGCGTTACCT GGAGCGGGTA AACGGCCTGA AACAGGTGAT GGATGCGGCG
CAGTTGCGGG TATTGTTGCT GCAGCGGCAG ATTCAGCAGG TGCAGAATGA AAACCCGGCA
CCGGCGGTGT CAGCGCGCGC GGCGCATTAG
 
Protein sequence
MKYRKSPFTS GKGESKRAAM AGACIFLSAF LISTSVDAST IYRWVGGGGV VSYGEAPPPG 
AKGVEQISGA PQASVSTPMP GSGVAGATST PEPPVPAPAA RPAANPALKR LQGELLAARL
TLIQATKNYE QGKAIRTGNE RNYARYLERV NGLKQVMDAA QLRVLLLQRQ IQQVQNENPA
PAVSARAAH