Gene Lferr_0599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0599 
Symbol 
ID6876561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp558027 
End bp558548 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID642788482 
Productamino acid-binding ACT domain protein 
Protein accessionYP_002219060 
Protein GI198282739 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG CCCTTCTTAC GGTCATCGGC GAAGATCGCC CCGGTATCGT CGCCGCGGTC 
ACCCAGGCCC TGTTCACCGC GGACTGCTCC ATCGGCGACG CCTCGATGAT GCGTCTCGGC
GGTTACTTCA CCATCATGCA GATCATCGAA TACCCGCGTG ATCTGGGCTC CGTGGAAATG
GCGCTGGACC CGGCCATCAA ACGCCTCAAT CTGCGCGTAC ATCTGGACCC CATCTCCAGT
GTCGCGCCGA CTGCGGATAT GCCGAATACC CGGGTCACGG TCTACGGGGC CGATCATCCG
GGCATCGTCG CGGGTGTCAC CGGAGCGCTG GCGGCTATCG GGTTCAATGT GATCGACCTG
GAAAGCGAGA GCACCGGTAG CCCCGAGCGG CCTCTCTATG TGATGGTCAT TCAGGGCTAC
GCCCCGGAGG GTACGGAAAG CGTCCGCAAG GTCGTAGCGC CGTTGCGCGA AAAGGAAGGG
GTGGAAATCG GTGTGCATCC CATCGAGTCG GCGGTGTTTT GA
 
Protein sequence
MSQALLTVIG EDRPGIVAAV TQALFTADCS IGDASMMRLG GYFTIMQIIE YPRDLGSVEM 
ALDPAIKRLN LRVHLDPISS VAPTADMPNT RVTVYGADHP GIVAGVTGAL AAIGFNVIDL
ESESTGSPER PLYVMVIQGY APEGTESVRK VVAPLREKEG VEIGVHPIES AVF