Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0450 |
Symbol | |
ID | 6876402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 424443 |
End bp | 425576 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788323 |
Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
Protein accession | YP_002218911 |
Protein GI | 198282590 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000365915 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATCCTGC CCGGCGCTAC TCTCGGTGTG CTCGGCGGCG GACAACTCGG TCAGATGTTT GCCCTCGCCG CCCGGCGCGT CGGTTACGGC GTATGGGTAC TGGACCCCGA TCCGGATTGT CCCGCCGCCG CGGTGGCAGA CCGCCATCTC TGCGCGGCGT ATGACGATAT CCACGCATTA CGGGAGTTGA CGGCTACCTG TGCGGCGGTT ACTACGGAAT TCGAGAATGT TCCGCTGGCG GCCTTGGAGC GTGTCGCCCG GGAGGTACCG ATGCATCCCG GCGTCGGGGC GGTGGCCATT GCCCAGGATC GGGCACGGGA AAAGGCCTTT TTCCGCGACC TGAATCTGGC TGTTGCGCCT TTCGCAGTGC TGCGCAGCGC CGCCGACCTG GCAACGGCAG CGGCGGCGGT GCCCTTTCCG GCCATTCTCA AGACGGCGCG TCTCGGTTAT GACGGCAAGG GGCAGATCGA TGTGGCTTCC GCAGCAGACC TGGCTGCCGC CTGGATATCA CTGGGGGAGA AGGAAGCGGT GCTGGAAGGG CGCGTCGCGC TGGCTCAGGA GCTTTCCATC ATTCTGGCAC GCACTATCGA TGGCATGATG GTGTTCTACC CGGTGGCCGA AAATATCCAT TACCGGGGCG TTCTCGACCT CAGCATCGTA CCCGCCCGTG CCGTCGAGCC GCTGCAGGAG CAGGCGCGAA ACAGCGCCGC ACGGATTGCC GGGGCGCTGG ATTATGTCGG CGTGTTGGCG GTCGAATTTT TTGTGGATGG CGCCGGTCAA CTGTTGGTGA ACGAGATGGC GCCCCGTCCT CACAACAGTG GTCACTTTAC CGTGGACGCC TGTGTGCACA GTCAGTTCGA TCAGCAGGTG CGGACCCTCT GCGGTCTGCC ACTCGGGGAT ACCCGCCTGA TCAGCCCTGT GGTGATGATG AACTTGCTGG GCGATCTCTG GGATAGGGGT AGCCCGGACT GGGAGGCGCT GCTGCGCCAT CCCCAGCTCA AGCCCCACCT GTACGGGAAA AAGGAGGCCA GACCGCGGCG GAAAATGGGG CATGTGAACG CGCTCGCCCT GGACACGGGT CGGGCGCTTG ACGTACTGGA AACCTTGCGT CGTGACTGGC GATGGCCAAA CTGA
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Protein sequence | MILPGATLGV LGGGQLGQMF ALAARRVGYG VWVLDPDPDC PAAAVADRHL CAAYDDIHAL RELTATCAAV TTEFENVPLA ALERVAREVP MHPGVGAVAI AQDRAREKAF FRDLNLAVAP FAVLRSAADL ATAAAAVPFP AILKTARLGY DGKGQIDVAS AADLAAAWIS LGEKEAVLEG RVALAQELSI ILARTIDGMM VFYPVAENIH YRGVLDLSIV PARAVEPLQE QARNSAARIA GALDYVGVLA VEFFVDGAGQ LLVNEMAPRP HNSGHFTVDA CVHSQFDQQV RTLCGLPLGD TRLISPVVMM NLLGDLWDRG SPDWEALLRH PQLKPHLYGK KEARPRRKMG HVNALALDTG RALDVLETLR RDWRWPN
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