Gene Lferr_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0448 
Symbol 
ID6876400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp423219 
End bp423911 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID642788321 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_002218909 
Protein GI198282588 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000291466 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGTCA TGGAAGAAGC GCTCAAGACC AGCCATCGGG CCATCCGCAG TTTCGTCCTG 
CGCCAGGGCC GCATCACCGC TGCCCAGACA CGGGCTGTTG CGGAATATTT GCCGGCCCGA
CAGATAGATG CCCATGCCGA ATGGCGGGAT CCCTGGAATA ACCAAAGACC ACTTATGCTG
GAAATAGGCT TTGGTAACGG TGAGCACTTG GCCGCCATCG CCGCGCAACG GCCGACTTGG
GGCTGCATCG GCATCGAGGT GCATACACCC GGCGTGGGGT CCCTGCTGCT GCAACTGGTG
GAGGCCGGAA CCGACAACGT CCGGATCGTC CACGACGATG CCGTCACTTG GCTGAAGACT
CTGCCGGACG CTATTCTGCG CTGCATCATC ATTCAGTTTC CTGATCCGTG GCCTAAAAAA
CGGCAACAAA AACGCCGCCT TATCCAGCCG GATTTTGCTG CAGTGTTGTG CCGCCTGCTG
CAGCCCGGAG GCGAACTGCA ACTGGCCACG GACTGGGCGG ATTATGCTGG GCAGATGCTC
ACAGTGCTCA ACGCCACCCC GGGCCTGCAA AATGCAGATG CCGACAATGG CTATGTCTTC
CGCCCCGACA ACCGCATCCT GACCCGATTT GAGCGGCGCG GGCAACGACT GGGGCATGCG
GTTTATGACC TCTGCTATCG ACGCATCCCG TGA
 
Protein sequence
MPVMEEALKT SHRAIRSFVL RQGRITAAQT RAVAEYLPAR QIDAHAEWRD PWNNQRPLML 
EIGFGNGEHL AAIAAQRPTW GCIGIEVHTP GVGSLLLQLV EAGTDNVRIV HDDAVTWLKT
LPDAILRCII IQFPDPWPKK RQQKRRLIQP DFAAVLCRLL QPGGELQLAT DWADYAGQML
TVLNATPGLQ NADADNGYVF RPDNRILTRF ERRGQRLGHA VYDLCYRRIP