| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0440 |
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| Symbol | |
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| ID | 6876392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 415636 |
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| End bp | 416304 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788313 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002218901 |
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| Protein GI | 198282580 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.475381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000142104 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCATCG CTGAACGCCT AGCCCATGTG CAAGGGGAGA TTGCCGATCA CCCGCCGCAG
TGCCTGCTGG CGGCCAGCAA GCACGTTACG GCGGCGACAC TGCGTGACGC CTATGCGCTC
GGACTTCGCC ACTTCGGCGA AAACTTCCTG CAGGAGGCCC TGGACAAACA GACGGCACTG
AGAGATCTGG ATGGCATCAT CTGGCATTTC ATAGGTCGCA TCCAGCGCAA CAAGACCGCA
CTACTGGCCC GGCATTTCGA CTGGGTAGAA AGTGTGGACC GCCCACTCAT CGCGGAACGG
CTCCATGCCG CCCGCGCCGG CATGGAGCCG TTGAATGTGC TGATCGAAGT CGCCATCAGT
GGGGAGGAAA CCAAGGGCGG CTGCGCGCCA GAAGACGTTC CGGAATTGGC CCTCGTCATT
TCCCGGTTGT CCCATTTACG GCTCCGCGGT CTGATGGCCC TGGTCCACCC GCAACCGGAG
CTGGCAGAGG CCGACTTCCG CCGGATGGCA GAACTTTTTC TCGCGCTGCG GCAGACCCAG
GTCCATGCCG ATCTGGATAC CCTCTCCATG GGCACTTCGG CGGATTACCT CCAGGCCCTG
CAGCAGGGTG CCACAGAAAT CCGTCTTGGT ACCATCCTCT TCGGAGCCCG TGCCCAGGAG
CCCTTATGA
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| Protein sequence | MSIAERLAHV QGEIADHPPQ CLLAASKHVT AATLRDAYAL GLRHFGENFL QEALDKQTAL
RDLDGIIWHF IGRIQRNKTA LLARHFDWVE SVDRPLIAER LHAARAGMEP LNVLIEVAIS
GEETKGGCAP EDVPELALVI SRLSHLRLRG LMALVHPQPE LAEADFRRMA ELFLALRQTQ
VHADLDTLSM GTSADYLQAL QQGATEIRLG TILFGARAQE PL
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