Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0406 |
Symbol | |
ID | 6876358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 384851 |
End bp | 385930 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788279 |
Product | glycosyl transferase group 1 |
Protein accession | YP_002218867 |
Protein GI | 198282546 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0116053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGCAG TTCCGCGTCG CCTGCTCTGG GTGGGCACCA ACCCCGGCGG TGGTGGCACG GAGACGCACA TGATCACCCT GAGTCGCGCC CTGGCCGATC AGGGGGCGGA GGTGCATTGT CTGGTGCATC CGCAAGGACG GATCGCGCAG GCGCTGGAGA CCGCGCCGGT CACCAGGCAT TTCGGAGTCT TCCGCAACAG CGCCGATCCC GGCGGCATCC GTGCCTTGCG TCGGGCTATC CGTATGGTGC AGCCGGACTG GGTTATCGGC AGCTTCAGCA AGGAATACTG GCCGCTGGCA CTGATCAGCC GCAGTGAGGG GCGGCCTCTT GCATTGTTCC GGCACATGGA TCTGCACCTC AAGCCCGGTA CCCGCTGGCT GCTCTCGCGT TGGCCTCTGC GCTTGTTCGC GATCTCCGCC TATCTGCGGG AGCGGCTGAT CCTGCAGGGC GTGCCCGCCG AACGTGTCGA AGTATTGGCG AATCCCCTGC GTCTGGCAGA TTTTCAGCGT GATTTCACGG CGCGAACGCG GCAGCGCGCC GCCTTGGGAT TGACGGATGA GGATTTTCTC GTGGGCTTTG TCGGCGCCTG GCATCGTGGC AAGGGTGTGT TCCTGCTTGC CGATGCCATC GACGCCGCGC ATGCCACCGA TGCACGGGTG CATGGACTGT GGTTGGGGGG AGGCACCCAT GAAGCGGAGT TGCGCGCGTA TCTGGAGGAT AAGCCCTGGC ATCATCTGCT GGGCTGGCAA GATCCGGCAA CGCCCTGGTA CAGCGTCATG GATACCCTTG CCTTGCCTTC CATCGAGCCG GATACCTTTG GCCGCGTCTG TCTGGAGGCG CAGGCCTGCG CGACACCGGT GCTGGGTGCG GCCATGGGGG GTATTCCCGA GAGCTTTGCG GCGGATCGGA GCGGTTTGTT ATTGCCTGCC GGAAACATGG CATGCTGGCG GGACGCTATC CTCCGCTTGA CGGCGGATCG GCATTTGTGC GCGGAGTTCG GTGCCGCCGG TCCGGAATAT GCCCGGCATT TTGACGCCGG CATCATCGCC CGTGATCTTC TGGCCAGCCT GCCGCGATGA
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Protein sequence | MIAVPRRLLW VGTNPGGGGT ETHMITLSRA LADQGAEVHC LVHPQGRIAQ ALETAPVTRH FGVFRNSADP GGIRALRRAI RMVQPDWVIG SFSKEYWPLA LISRSEGRPL ALFRHMDLHL KPGTRWLLSR WPLRLFAISA YLRERLILQG VPAERVEVLA NPLRLADFQR DFTARTRQRA ALGLTDEDFL VGFVGAWHRG KGVFLLADAI DAAHATDARV HGLWLGGGTH EAELRAYLED KPWHHLLGWQ DPATPWYSVM DTLALPSIEP DTFGRVCLEA QACATPVLGA AMGGIPESFA ADRSGLLLPA GNMACWRDAI LRLTADRHLC AEFGAAGPEY ARHFDAGIIA RDLLASLPR
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