Gene Lferr_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0360 
SymbolanmK 
ID6876311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp336955 
End bp338118 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID642788233 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_002218821 
Protein GI198282500 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.286729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.775767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCA CCAGTGCCGA TGGTGTGGAT GCCGCGGTGC TGGATTTGGC CGTCGCCGGC 
TGTGGGGGGT ATCGGGGCGT TTTCACGCAC GCCTTTGAGC CCGCACTGCG CACGGAAGTG
CTGGCCGCCA ACGGGCCATT GGGTGTCGAG GCGATGGCGC AACTCGACCG ACGTCTGGGT
GCCTGTTATG CACGGGTGGC CCGAGAGGCC GTGGACCGCT TGGGTCCGGT GGACTTCATC
GCCCTGCATG GACAGACCAT TCGTCATCAG CCGCGGGGTG AGCCCGGTTT CACGTTGCAA
ATTGGTGCGG CGGCGGATAT CGCGGTGGCC ACAGGTCTGA CCGTGGTCCA CGATTTCCGG
CGTACGGATG TGGCAGCAGG GGGGGAGGGC GCACCGCTGG TGCCGCCTTT CCATCAATAC
TGCTTTCAGG ATGAACAACC GCGTCTGGTA CTCAATCTCG GTGGCATGGC CAATGTGACC
TGGTTGCCGG GTACCGGCGA CCCGCGCCCG CTGCTGGCAT TCGACTGCGG TCCTGGTAAC
GTGCTCATGG ACGCCGCCGT AGAGTTGTGC AGCGCCGGAC AGGCTACCTG CGACGTGGAT
GGCCGGTTGG CGGCTGCCGG ACAGTGCGAT GTGGTACGCC TGGAGGAATG GCTGGACCAC
GTGTTCTTCC GGCAAGCACC CCCCAAAAGC ACGGGCCGGG AGACTTTCGG CATGCCGCTG
GTGACGCGTT GGTGGTCTTC CTGGCGGGGT TCCGCGGCGG ATTTTCTGGC GACACTGACG
GCATTGACCG CCGAGTCCGT GGCACGGGCG GTGAGAGCCT GGACACCGGG TGCCGCGGAG
ATGCTGGTAT TCGGCGGTGG GGCCGAAAAC CAGGCCCTGA TGCAGGCCCT GCAGGACGCC
ATGAAGGAGA CCAGGGTGCT CCACGGCGGC CGGCACAGCG GTATCCCCGG ACAGGCCCTG
GAGGCGCTGG CCTTTGCCTG GCTGGGCAGC CAGTGCCTGC TGGGGAAGCG CCTGGACCTG
GAGCGGGTTA CGGGGGCGCA GCACCCCATG ATCCTGGGTA ATATTCTGCC CGGAGATAAC
TGGCCGGATC TGCTCGTCCA ACTCTCGCAA CAGCCGGAAA TCACCGCCAG GGAAGGCCCC
TATCGTGCCC TCCGCTCAGT CTGA
 
Protein sequence
MSGTSADGVD AAVLDLAVAG CGGYRGVFTH AFEPALRTEV LAANGPLGVE AMAQLDRRLG 
ACYARVAREA VDRLGPVDFI ALHGQTIRHQ PRGEPGFTLQ IGAAADIAVA TGLTVVHDFR
RTDVAAGGEG APLVPPFHQY CFQDEQPRLV LNLGGMANVT WLPGTGDPRP LLAFDCGPGN
VLMDAAVELC SAGQATCDVD GRLAAAGQCD VVRLEEWLDH VFFRQAPPKS TGRETFGMPL
VTRWWSSWRG SAADFLATLT ALTAESVARA VRAWTPGAAE MLVFGGGAEN QALMQALQDA
MKETRVLHGG RHSGIPGQAL EALAFAWLGS QCLLGKRLDL ERVTGAQHPM ILGNILPGDN
WPDLLVQLSQ QPEITAREGP YRALRSV