| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0316 |
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| Symbol | |
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| ID | 6876266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 301384 |
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| End bp | 303222 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788188 |
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| Product | Putative lipoprotein-like protein |
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| Protein accession | YP_002218777 |
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| Protein GI | 198282456 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.915463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000474295 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACTC CCGCAACCTT GAAGGCCTCT TTCCGCCTGC TGATGACTCT GGCCCTGGCC
ACGGGCCTGA GCGCTTGCGC GAGTATGCCA CATAAGGCGC CACCTTCGTC GAATCCGCCG
CCTGTCGAAA CGACCACGGC CGTTTCTCAG ACACCGCTGG CAGAGCGCGC CGACCAGCTC
ATGATCACAG GGCACTACCA GGAAGCGGCC AAGGACTATA TTCACGCCGC CGCCGCTGTG
CGGGGGCGAG CCCAGCTCGA CTACCTGATG AAAGCGGCAC AGGCTTCCCT GAAGGGGCAA
AAGCCGCAGG TTGCGATATT ACTGGCCAAT GAAGTACTGC GCTTGCAGCA CGACAACGCC
AGCCTGCGTG GCGCAGCGCT CTGGGTCCGC GCCCAGGGAC TCATGGATCA GGGGCAGACC
CCCAGCGCCA AGGGCAACCT CGAAGAAATC CTGACCATCA CCGGCACACC CCAGGAAGTG
CGTGCCCGGG CCATGGGCAC TCTAGCCACG CTCTATACGC AGGAAGGCCA TGAACTCACC
GCACTGAATT TTCTGATCGA ACGGGATGGC CTGCTGAGCG GCGATGCGAT CGCGGAGAAT
CACCGCCGCA TTCATGCCCT CCTCGACCAG CAGTCGGTAG CAAAACTTCA GAACTGGCAG
GGACGTAGCG GTAATCCCCT CGTACAGGAG TGGATCGCCC TCGCCCTGAT CACTCGCCAG
AATCCCGATC CCCAACAGCG GCAGACGGCG ATCCGTGCCT GGCTGGCGGC ACATCCGGGG
CACCCCCCCA TAAACTTCTC GGACGACGAC ACGACGGTCG CCGGCGCTTC CGCCCTCAAC
CGCGCGCCCG GCGGCATATG CGCTTTGTTA CCTTCCGGCG GGTCCTATGG GCCGCTCTCC
CAGGCCATTG CCGCCGGGAT GGAAACAGCA GCGCAATTAC GGTCTGGACC CGCAGTGCGC
GTTCTGCGGA GTACCGGCAA CCCCAGTTAC ACCGCCGTGC TCTTTGAGCG TGGGATCAGG
GAAGGCTGCA AAATCTTTGT CGGCCCCTGG CTGCCGCAGG ATATCAACGC GGTAGCCGCC
GTCAGAAAGC CCAGTGATCC GCCGGTCATA GCCCTCGGCA CGGCATCTGA TGTGCGGCAG
CCCGGACTCT ATACCCTAAG CCTGAGTCGG GACGTCGCGG CCCGGCAGAT CGCCACCCAG
AGCTACGCAG CGGGTTATCG TCATGCCTAC GTGCTATATC CCCAGGACTC CAGCGGAGCC
GCCATTCAGG CGGACTTTAT CACCGCCTGG AAGCATCTCG GCGGCGACGT CAGTGGCGTC
ACCACCTACC TGCCCGGTCG TTCACTCACC AGCAAGGTGC AACAACTGTT GAGCGTGTCA
CCCGGGCGAC ACAGTTTTAT CTTTTTGGTT ACCGATGCGA AAAACGCCAA CTCTGCGGTC
ACAGCCATCC GGCTGATCAA TCCCACTGTG CCTGTCTTCA GTCCGGCGTT GCTGCACGGC
GCAGTCTTGC CCAGCGACGC GCAGGGGCTC TCCGGCATTG AATCGGTCGA TATGCCCTGG
ATCATCAACC CTGGGCAAAG CTGGCCGCAA GCATCACTAC TGTTGCGTAC CAATCTCCCC
AACGCCAGTG ACGCCCAGTG GCGCATGGCG GCCTTCGGGC TGGATGCCTA TCGAATGGCG
GAGCGCGTTC TGGACCAGGA TATGACTGGC AGCCTGAACG GCGCTACAGG CGTCCTCCGC
TTTGCTGCCG ACGGCCGCAT CGTGCGGGAC ATGGAATGGA TGGAAGTGGA GAACGGACAG
GTCGTCCCTT TATCGGGAGT GCCTGGGCCG GGCGCCTGA
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| Protein sequence | MTTPATLKAS FRLLMTLALA TGLSACASMP HKAPPSSNPP PVETTTAVSQ TPLAERADQL
MITGHYQEAA KDYIHAAAAV RGRAQLDYLM KAAQASLKGQ KPQVAILLAN EVLRLQHDNA
SLRGAALWVR AQGLMDQGQT PSAKGNLEEI LTITGTPQEV RARAMGTLAT LYTQEGHELT
ALNFLIERDG LLSGDAIAEN HRRIHALLDQ QSVAKLQNWQ GRSGNPLVQE WIALALITRQ
NPDPQQRQTA IRAWLAAHPG HPPINFSDDD TTVAGASALN RAPGGICALL PSGGSYGPLS
QAIAAGMETA AQLRSGPAVR VLRSTGNPSY TAVLFERGIR EGCKIFVGPW LPQDINAVAA
VRKPSDPPVI ALGTASDVRQ PGLYTLSLSR DVAARQIATQ SYAAGYRHAY VLYPQDSSGA
AIQADFITAW KHLGGDVSGV TTYLPGRSLT SKVQQLLSVS PGRHSFIFLV TDAKNANSAV
TAIRLINPTV PVFSPALLHG AVLPSDAQGL SGIESVDMPW IINPGQSWPQ ASLLLRTNLP
NASDAQWRMA AFGLDAYRMA ERVLDQDMTG SLNGATGVLR FAADGRIVRD MEWMEVENGQ
VVPLSGVPGP GA
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