| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0300 |
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| Symbol | |
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| ID | 6876250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 285144 |
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| End bp | 285884 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642788172 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002218761 |
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| Protein GI | 198282440 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000612243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAAGCTA CCGGAAAAGT CGTTCTCATC ACGGGCGCCG CCCGCAGGGT AGGCGCCGCC
ATTGCCCGCC AGCTCGCCGC GGAAGGCTGC CAGCTCGCCC TGCATTATAA GCGATCCGCC
GCAGACGCCG AAGCCCTGGC GCAGGAGTTG CGCGCGCGGC ATGGAACTGA ACCCTTGTTG
ATCGCGGGCG ACCTGGCTGC CCCGGAAACG CCAGCGCACC TGATTGATGC CGCTATCGGG
CATTTTGGTT GCCTGGACGG CCTCGTCAAC AACGCTTCGT TGTACTCCCC TGCGCCTTTC
GGCGAAATCA CGCCGGAAGA CTGGGCGGCG ATGGAGGCCG TGCATCTGCG CGCGCCACTC
TTTCTGACCC AGGTCGCCGC ACCGCATTTG CGAAAAACCG GCGGCGCCGT CGTCAACATC
GGCGACATCC ACGCCGAAAT CCCCCTGCGC GGTTATCTGC CTTACAGTGT GACGAAGGCG
GGTCTGCTGG CCCTCACCCG CGCCCTCGCC AAAGAGCTGG GGCCGGAGAT CCGCGTCAAC
AGCGTCTCGC CCGGCGTGGT GCTCTGGGCC GAGGACAAGG ACCCGCCCGA CGGCGACCAG
CAGGGACTCA TCGAACGCAA CGCCCTCAAG CGCGTCGGCA GCCCGGAGGA TATTGCCGGC
GCCATCGCCT ATCTGCTTTT CGACGCGCCT TACGTCACCG GCCACAATCT CGTCGTCGAT
GGCGGCCGCA TGTTATATTG A
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| Protein sequence | MKATGKVVLI TGAARRVGAA IARQLAAEGC QLALHYKRSA ADAEALAQEL RARHGTEPLL
IAGDLAAPET PAHLIDAAIG HFGCLDGLVN NASLYSPAPF GEITPEDWAA MEAVHLRAPL
FLTQVAAPHL RKTGGAVVNI GDIHAEIPLR GYLPYSVTKA GLLALTRALA KELGPEIRVN
SVSPGVVLWA EDKDPPDGDQ QGLIERNALK RVGSPEDIAG AIAYLLFDAP YVTGHNLVVD
GGRMLY
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