Gene Lferr_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0210 
Symbol 
ID6876160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp199264 
End bp199656 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID642788087 
Productprotein of unknown function DUF302 
Protein accessionYP_002218676 
Protein GI198282355 
COG category[S] Function unknown 
COG ID[COG3439] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.279371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC GGTACGGTTT CGGCAAGGCG GTCGCGTCTA CTTTCAATGC GGCAATCGAG 
AAGGTCACCC AGGAGTTGCA AAAGGAAGGC TTCGGCGTAC TGACAGACAT CGACGTGGCG
GCGACCCTGA AGAAGAAACT CAACCAGGAC ATGCCGCCCT ACCGCATCCT CGGGGCCTGC
AACCCGCCGC TGGCACACCG GGCACTGGAA GCGGAACCGT CGATCGGCCT GCTGCTGCCA
TGCAACGTCG TAGTGCGCCA GGACGATGCA GGCAAGGTCC AGGTGGAATT CATGGATCCC
AACGCTGTGC TGGATCTCGT GGCAAAGCCG GAGATCAACC GGTTGGCCAG TGAGGTTCGG
CAGAAGCTGG AAAGAGTGCT CCATGCGCTG TAA
 
Protein sequence
MSTRYGFGKA VASTFNAAIE KVTQELQKEG FGVLTDIDVA ATLKKKLNQD MPPYRILGAC 
NPPLAHRALE AEPSIGLLLP CNVVVRQDDA GKVQVEFMDP NAVLDLVAKP EINRLASEVR
QKLERVLHAL