| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0155 |
|---|
| Symbol | |
|---|
| ID | 6876105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 146114 |
|---|
| End bp | 146818 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642788034 |
|---|
| Product | MgtC/SapB transporter |
|---|
| Protein accession | YP_002218623 |
|---|
| Protein GI | 198282302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1285] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAC AGGTGCCCAA CCTCATTCTC ACTGCGGAAG ACTTGCTCCT CGCCTTTGTC
CTGGGTGCCC TCATTGGTAT TGAGCGGCAA TGGCGTCAAC GGACTGCGGG CCTGCGAACC
AATACGCTGG TGGCGGTGGG CGCTGCCATC TTCGTGGACC TGGCCCTGCG CATGGGCGGA
TCGGCAGAAG CCATCCGGGT AGTCGCTTAC GTCGTTTCGG GTGTGGGCTT TTTGGGCGCG
GGAACCATCA TGAAGGAAGG GGCCAATGTG CGCGGCCTCA ATACCGCCGC GACCTTGTGG
GGCTCCGCGG CCGTCGGCGC CTGCGCCGGG GCGGAGCAAT GGCTGCCGGC GATCCTGGCG
GCGGGCTTCG TGATCAGTGC CAACACCCTC TTGCGCCCAG TGGTGAACCG CATCAACCGG
GCGCCACTGA GCGAGACCGG CACCGAACTC AATTATACAT TCTCTCTCAT CGTGCCCCGC
GGCCAGGAAG CGGCACTCCT GGATATCCTC AGCGAAAAAC TGGAAACAGC CGGTTATCCC
GTACGCGATT TGCGCATGCA CCCCTTCGGA CAGAGCGAAA CGGAAATGCA TGCGATCCTT
TTGCCCAGCA GCGTCGATGG CGAGGTGCTG GATCGCCTGT CCGCGCAGTT CAGCCAGATG
CCCCAGGTGC GCCAGGCCTT CTGGAACCAG AGCGCCGGTG AGTGA
|
|---|
| Protein sequence | MTPQVPNLIL TAEDLLLAFV LGALIGIERQ WRQRTAGLRT NTLVAVGAAI FVDLALRMGG
SAEAIRVVAY VVSGVGFLGA GTIMKEGANV RGLNTAATLW GSAAVGACAG AEQWLPAILA
AGFVISANTL LRPVVNRINR APLSETGTEL NYTFSLIVPR GQEAALLDIL SEKLETAGYP
VRDLRMHPFG QSETEMHAIL LPSSVDGEVL DRLSAQFSQM PQVRQAFWNQ SAGE
|
|---|
| |