Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0147 |
Symbol | |
ID | 6876097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 138282 |
End bp | 138935 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642788026 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002218615 |
Protein GI | 198282294 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAG CACGAAAAGC GCGGGCAGCA CCCGATAAGC AAGAGCGCCG AGAGTCCATT CTCAAGGCTG CAGAGGAAGT CCTTCCTTTG GGTGGCCCAT TGCCATTGAT CGCATCGATC AGCGTAGCGG CACACCTCAC TCAAGGTGCT CTTTACCGCT ATTTCAGCAG CAAGGAAGAA ATTTACGCCA CGCTGCTGGA GCGCGAAATG GGGTTTTTGC TCGAACATAT CAAGCAATTG ATTGCGGTCC ACTATGGCTC CCCTGCGGCG ATTGCCGATG GAATTGCCGA CGGGATTACT CGATATTGCC TCGAGCATAC AAAAACTTTC TATCTGGCCA GCCTCAGTCC CGCTATTCTC GAAGCCAATA CGCAAGAAGC ATTCGCCCGC CAACTCAAAC GCGAACTTGC AACGGAAGTG CGCACAATTG CTACCGCGCT CGTGGAAGCA ATCCCCTCGC TGCACTTTGC TAGCGCTGTT GATCTCCTAC TCACGAGCCA CGCCCTCATT ATCGGATTAT GGCAGGTGGC CTACCCGCCG GCTGTTATCG AGAGGATTCT CCAGGAAGAG GAGACAAAGG TTTTACGGAT AGATCTTGAT AATACGCTTT CTACGGCAAT GCATTCTCTA TGGAGGGGGT GGATATATGA ATGA
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Protein sequence | MQKARKARAA PDKQERRESI LKAAEEVLPL GGPLPLIASI SVAAHLTQGA LYRYFSSKEE IYATLLEREM GFLLEHIKQL IAVHYGSPAA IADGIADGIT RYCLEHTKTF YLASLSPAIL EANTQEAFAR QLKRELATEV RTIATALVEA IPSLHFASAV DLLLTSHALI IGLWQVAYPP AVIERILQEE ETKVLRIDLD NTLSTAMHSL WRGWIYE
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