Gene Lferr_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0147 
Symbol 
ID6876097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp138282 
End bp138935 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID642788026 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002218615 
Protein GI198282294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAG CACGAAAAGC GCGGGCAGCA CCCGATAAGC AAGAGCGCCG AGAGTCCATT 
CTCAAGGCTG CAGAGGAAGT CCTTCCTTTG GGTGGCCCAT TGCCATTGAT CGCATCGATC
AGCGTAGCGG CACACCTCAC TCAAGGTGCT CTTTACCGCT ATTTCAGCAG CAAGGAAGAA
ATTTACGCCA CGCTGCTGGA GCGCGAAATG GGGTTTTTGC TCGAACATAT CAAGCAATTG
ATTGCGGTCC ACTATGGCTC CCCTGCGGCG ATTGCCGATG GAATTGCCGA CGGGATTACT
CGATATTGCC TCGAGCATAC AAAAACTTTC TATCTGGCCA GCCTCAGTCC CGCTATTCTC
GAAGCCAATA CGCAAGAAGC ATTCGCCCGC CAACTCAAAC GCGAACTTGC AACGGAAGTG
CGCACAATTG CTACCGCGCT CGTGGAAGCA ATCCCCTCGC TGCACTTTGC TAGCGCTGTT
GATCTCCTAC TCACGAGCCA CGCCCTCATT ATCGGATTAT GGCAGGTGGC CTACCCGCCG
GCTGTTATCG AGAGGATTCT CCAGGAAGAG GAGACAAAGG TTTTACGGAT AGATCTTGAT
AATACGCTTT CTACGGCAAT GCATTCTCTA TGGAGGGGGT GGATATATGA ATGA
 
Protein sequence
MQKARKARAA PDKQERRESI LKAAEEVLPL GGPLPLIASI SVAAHLTQGA LYRYFSSKEE 
IYATLLEREM GFLLEHIKQL IAVHYGSPAA IADGIADGIT RYCLEHTKTF YLASLSPAIL
EANTQEAFAR QLKRELATEV RTIATALVEA IPSLHFASAV DLLLTSHALI IGLWQVAYPP
AVIERILQEE ETKVLRIDLD NTLSTAMHSL WRGWIYE