Gene Lferr_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0142 
Symbol 
ID6876092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp131809 
End bp133446 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content47% 
IMG OID642788021 
Producthypothetical protein 
Protein accessionYP_002218610 
Protein GI198282289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.843522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGA AGCTCCTTAT TGCTGACTGG CCGTTTGGGC AAGGCGAACT AGCGACATTG 
CACTGGTTAC GCTCACCTTA TATGGCTGGT GATGATCGTG GCTGGTGCGT CGACGCTGTA
TTTCGTGGCG TGGAAAGTGG GAAAAGTCAT GATATCTCTC TGCCGTGGGG CATGCTGCCA
TACCTCAGGC TGGGTATGCT ATTCGAAAAT GGCAGACCAA AAACACGATC TGCAGACGCA
GGGCAGATAT CTATTGTTCG CCTTTTCAAT GACGCGAAAT TTGGTTTGCG ACGTGTCGGG
GGGGTTGTTT TAAAAAATCT CTACCCCCTT GATACACAAA TAAATCTTGA TGAGTTATGT
ATTAAGGTTG AGAACAATGA TCAAATAATG CTAGTCCCAT GCATAGAAAT AGCGAGGTCA
TTTTTTGCAC AATCTAGATT TTTATCTTAC GCATTGTTGC AGCCGGACAG TTTCTCCGAC
TTTGTGCGGG CCTGGCACTC TGATGGAAAA GTGACTCTTG AATTTTCCAG TTTTATTCCT
AAAAACATGA TAAAATCAGA TTTTATTATT TCAGTAGCAA AAATACTTTT TGATCAGGAT
TGGTCGGATC GATGGCGCGC TGTGTGGAGC CGACGTGCAG CGAAGGCATT AAAAATAGAG
GATAAAAATT ATCCAAAGTT AGAATGCTGG CCTCCTGTAG GACAGAACAG CAGTTGGAAG
GTGCGTGGAG TCACTTGGAA TAATCGGTTA CTCGTCCTGG AGATATTGGG AACGAAATAT
CGTGGCAACT TACCTTTTCA TGAAATTGAA TACTCACACC CTAGGTTAAA AAAAGGGATT
CTCGGAGATG AACGCTCTGT GTCGGGATCG AAGCCTGTAT CGGAGGATGC CGAGGACGAA
ACCCTCGTGG AGAATGTGGC TTCATCACCC AGTCACTTGG ATCGGCCCAT CGTTCTTTAC
ACAGAACGAG CGGAGCATCG CTGCTTGACC GTCGTCACTC CCCAGTCAGT ACGAGAAAAG
GTCGTAGTCA TAAATAAACT GACAGGAGGC TCTGACCGGA CCTCATCGAC GGGTGACATG
GGAACGAAAG CAATACGGCC TGTGAGTTTA CAGGACGAAG GAAGCTGCGG CGACGTGGAT
GCCGGAGAAT TTACAGGAGG CGATAAGTCA GGTGAACCCC CTAATTTTAA AAAACTCATC
ACCGCCATGG AATGTGTTCA GGAAGCCCAC TTACGTTTGC AGTTTGAATA TCAAATTGGT
TTGGCAGGAT CCAGGATTGG CGGGGGCGAC GCAGAGCCTA TAGAATATTT GCTGATCACG
CTAAAATATG CGGATGCTAC TGGTTATATA CTGGATGTGG ATCAGTCCAC GGGGCAGGGC
ATTTCTACGG TGGTTTTCGA GCTGGTTAAG CCCGATGTGG TGGTGGACAA GATCGTCAGA
AAACTGGTGG ACGACTGTAT TGCCGCCAAT GGATTCCTCA GCAAGGAGCT TTTAAATGGT
CAAACAGAGC GAATCCGATA CGCGTTGGCT AAACATACGC AGACGGATGG CTATGAATAT
GGCTTGCGCT TGGTCAGAAA GCTGCCTGGT ATTATGAAGC AGATGGGTGA GTTAAGCGTT
TCTTTTGGGG GTTGGTGA
 
Protein sequence
MARKLLIADW PFGQGELATL HWLRSPYMAG DDRGWCVDAV FRGVESGKSH DISLPWGMLP 
YLRLGMLFEN GRPKTRSADA GQISIVRLFN DAKFGLRRVG GVVLKNLYPL DTQINLDELC
IKVENNDQIM LVPCIEIARS FFAQSRFLSY ALLQPDSFSD FVRAWHSDGK VTLEFSSFIP
KNMIKSDFII SVAKILFDQD WSDRWRAVWS RRAAKALKIE DKNYPKLECW PPVGQNSSWK
VRGVTWNNRL LVLEILGTKY RGNLPFHEIE YSHPRLKKGI LGDERSVSGS KPVSEDAEDE
TLVENVASSP SHLDRPIVLY TERAEHRCLT VVTPQSVREK VVVINKLTGG SDRTSSTGDM
GTKAIRPVSL QDEGSCGDVD AGEFTGGDKS GEPPNFKKLI TAMECVQEAH LRLQFEYQIG
LAGSRIGGGD AEPIEYLLIT LKYADATGYI LDVDQSTGQG ISTVVFELVK PDVVVDKIVR
KLVDDCIAAN GFLSKELLNG QTERIRYALA KHTQTDGYEY GLRLVRKLPG IMKQMGELSV
SFGGW