Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0142 |
Symbol | |
ID | 6876092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 131809 |
End bp | 133446 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642788021 |
Product | hypothetical protein |
Protein accession | YP_002218610 |
Protein GI | 198282289 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.843522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGA AGCTCCTTAT TGCTGACTGG CCGTTTGGGC AAGGCGAACT AGCGACATTG CACTGGTTAC GCTCACCTTA TATGGCTGGT GATGATCGTG GCTGGTGCGT CGACGCTGTA TTTCGTGGCG TGGAAAGTGG GAAAAGTCAT GATATCTCTC TGCCGTGGGG CATGCTGCCA TACCTCAGGC TGGGTATGCT ATTCGAAAAT GGCAGACCAA AAACACGATC TGCAGACGCA GGGCAGATAT CTATTGTTCG CCTTTTCAAT GACGCGAAAT TTGGTTTGCG ACGTGTCGGG GGGGTTGTTT TAAAAAATCT CTACCCCCTT GATACACAAA TAAATCTTGA TGAGTTATGT ATTAAGGTTG AGAACAATGA TCAAATAATG CTAGTCCCAT GCATAGAAAT AGCGAGGTCA TTTTTTGCAC AATCTAGATT TTTATCTTAC GCATTGTTGC AGCCGGACAG TTTCTCCGAC TTTGTGCGGG CCTGGCACTC TGATGGAAAA GTGACTCTTG AATTTTCCAG TTTTATTCCT AAAAACATGA TAAAATCAGA TTTTATTATT TCAGTAGCAA AAATACTTTT TGATCAGGAT TGGTCGGATC GATGGCGCGC TGTGTGGAGC CGACGTGCAG CGAAGGCATT AAAAATAGAG GATAAAAATT ATCCAAAGTT AGAATGCTGG CCTCCTGTAG GACAGAACAG CAGTTGGAAG GTGCGTGGAG TCACTTGGAA TAATCGGTTA CTCGTCCTGG AGATATTGGG AACGAAATAT CGTGGCAACT TACCTTTTCA TGAAATTGAA TACTCACACC CTAGGTTAAA AAAAGGGATT CTCGGAGATG AACGCTCTGT GTCGGGATCG AAGCCTGTAT CGGAGGATGC CGAGGACGAA ACCCTCGTGG AGAATGTGGC TTCATCACCC AGTCACTTGG ATCGGCCCAT CGTTCTTTAC ACAGAACGAG CGGAGCATCG CTGCTTGACC GTCGTCACTC CCCAGTCAGT ACGAGAAAAG GTCGTAGTCA TAAATAAACT GACAGGAGGC TCTGACCGGA CCTCATCGAC GGGTGACATG GGAACGAAAG CAATACGGCC TGTGAGTTTA CAGGACGAAG GAAGCTGCGG CGACGTGGAT GCCGGAGAAT TTACAGGAGG CGATAAGTCA GGTGAACCCC CTAATTTTAA AAAACTCATC ACCGCCATGG AATGTGTTCA GGAAGCCCAC TTACGTTTGC AGTTTGAATA TCAAATTGGT TTGGCAGGAT CCAGGATTGG CGGGGGCGAC GCAGAGCCTA TAGAATATTT GCTGATCACG CTAAAATATG CGGATGCTAC TGGTTATATA CTGGATGTGG ATCAGTCCAC GGGGCAGGGC ATTTCTACGG TGGTTTTCGA GCTGGTTAAG CCCGATGTGG TGGTGGACAA GATCGTCAGA AAACTGGTGG ACGACTGTAT TGCCGCCAAT GGATTCCTCA GCAAGGAGCT TTTAAATGGT CAAACAGAGC GAATCCGATA CGCGTTGGCT AAACATACGC AGACGGATGG CTATGAATAT GGCTTGCGCT TGGTCAGAAA GCTGCCTGGT ATTATGAAGC AGATGGGTGA GTTAAGCGTT TCTTTTGGGG GTTGGTGA
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Protein sequence | MARKLLIADW PFGQGELATL HWLRSPYMAG DDRGWCVDAV FRGVESGKSH DISLPWGMLP YLRLGMLFEN GRPKTRSADA GQISIVRLFN DAKFGLRRVG GVVLKNLYPL DTQINLDELC IKVENNDQIM LVPCIEIARS FFAQSRFLSY ALLQPDSFSD FVRAWHSDGK VTLEFSSFIP KNMIKSDFII SVAKILFDQD WSDRWRAVWS RRAAKALKIE DKNYPKLECW PPVGQNSSWK VRGVTWNNRL LVLEILGTKY RGNLPFHEIE YSHPRLKKGI LGDERSVSGS KPVSEDAEDE TLVENVASSP SHLDRPIVLY TERAEHRCLT VVTPQSVREK VVVINKLTGG SDRTSSTGDM GTKAIRPVSL QDEGSCGDVD AGEFTGGDKS GEPPNFKKLI TAMECVQEAH LRLQFEYQIG LAGSRIGGGD AEPIEYLLIT LKYADATGYI LDVDQSTGQG ISTVVFELVK PDVVVDKIVR KLVDDCIAAN GFLSKELLNG QTERIRYALA KHTQTDGYEY GLRLVRKLPG IMKQMGELSV SFGGW
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