Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0030 |
Symbol | |
ID | 6875979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 33353 |
End bp | 34852 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642787909 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_002218499 |
Protein GI | 198282178 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.951716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.123126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAGTA TTGTACGTAA CCATGGTCCA CATAACAAAA TTCTTTTATC GGCATTATTG CTGGCCCTCT TCGGCTGGGT GCCGTTGGCG TCCGCCGCTG TTGCTGTTCC AATGGATTCA ACCGGGCCCT ATCGAACGGT ATCCCATCCG GAAAACGCAC CATCTGGCGT GGATGCCGGT GTCGGCCCAT CCGAATGGAC ACACGCATAC GCCAATCCCG CCCACAATGC TGCATTTCCG GTCCCTGACG ACGCGCCGGA ATGGATAAGG AACGGCGTAT CATGGTTGTT TCCGGAAGCC CGTGCATGGC CTCTGGCAAA CCCGCCGTTC GGGAGTAAGA CCTATGGGGC CGCAGAAGCT TCCGTAACAC AAACCCAGTT CTATGGAAAC GCACTGGGGC CATCGGTGGT CGACGGTGTG GTCTATGCGG AAAGCGATGA TATGTTTGCA TATGCGGTTA ACGCAAAAAC CGGGAAACTC ATCTGGCGCG CGAGTCCTGT CGGAAATAAT TTGATGGGCA ACCCGTTGGT CATTGGAAAT ACAGTATATC TATCCGCCGG CAGTGTAGCC TTCAACTTCG CCAACGTCTT GCGATATGCC CACAATCCAT CGGCCTCAGC GCGAGGCCTG AATGTGAGTT TCAACGGCAT TTATGCCCTT AACCGCAGCA ACGGCAAGCT TCTTTGGTAC TTCGCGACGC CTGGCGAAAC CATGGCGACA CCGGCCTATG ACAATAACAC CTTGTTTATT GCCGATGGCG CGGGAAATGC GTTTGGGATT AATGCCACGA CTGGCAAGCA GGTCTGGAAA ACCCATGTGG GGGGCATGGA CAACATGTCC AGTGTGACAG CGTATCGGCA CAATATCTAT TTTGCTATGG CTATCAAGCC ATATCTTTAT TGTCTGAATG AATCCAACGG GCATATCGTA TGGAAAGGGA CGATACCGGG TGCCAGTAAT ACTGGTATTG GCGACGTATC TCCGGCGGCG GCCGATGGTG TTGTCGTACT CGATGCGACA ACGAAACCGC AAGCCAATAA AAAGGCCATG TTCAGCAACG TCATTCGCGC ATTTGATGCC AAGACCGGCG CGGTTCTGTG GACCAGAAAC ATGGGTAGCG GAGGAAAAAT ACCCGCGTTT AAAGGGGGCG TTCCCATGAT CCACAACAAC ATCGTATATG TGGGCAATCC CGTCGCGTCA ACATACCAGG CGTATGAACT TAAAACGGGC AAGCTGCTCT GGACATGGCA TGTCCCAACC AAAGTTGCAG CAGGCGCGGG GCGTTCGGCT CCAACCTATT ACAAAGGATT GCTGTACATA ACTACCGGGC AGTACATATT TGTTGTGAAT CCCGCCACCG GAAAGGAACT TCACCAACAT CATATCGGTG GTCAGTTCGG GATCGAAAGC CCCGTAATAG TGGGGGGCAC CGTCTACCTG ACCAACTCCT GGGACTGGAT CATGGCGATT CCGCTAAAAA CGATAAGCCA TGGCAGTTAG
|
Protein sequence | MPSIVRNHGP HNKILLSALL LALFGWVPLA SAAVAVPMDS TGPYRTVSHP ENAPSGVDAG VGPSEWTHAY ANPAHNAAFP VPDDAPEWIR NGVSWLFPEA RAWPLANPPF GSKTYGAAEA SVTQTQFYGN ALGPSVVDGV VYAESDDMFA YAVNAKTGKL IWRASPVGNN LMGNPLVIGN TVYLSAGSVA FNFANVLRYA HNPSASARGL NVSFNGIYAL NRSNGKLLWY FATPGETMAT PAYDNNTLFI ADGAGNAFGI NATTGKQVWK THVGGMDNMS SVTAYRHNIY FAMAIKPYLY CLNESNGHIV WKGTIPGASN TGIGDVSPAA ADGVVVLDAT TKPQANKKAM FSNVIRAFDA KTGAVLWTRN MGSGGKIPAF KGGVPMIHNN IVYVGNPVAS TYQAYELKTG KLLWTWHVPT KVAAGAGRSA PTYYKGLLYI TTGQYIFVVN PATGKELHQH HIGGQFGIES PVIVGGTVYL TNSWDWIMAI PLKTISHGS
|
| |