Gene Lcho_4336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4336 
Symbol 
ID6164002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4852240 
End bp4852899 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID641667113 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001793352 
Protein GI171061003 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA CAGAAACCAC TTCGCTCGCC TTGCCGGTGT TCGTGCAAGG CCTGGCCCTG 
AGCTTCGGGC TGATCGTCGC CATCGGCGCG CAGAACGCGT TCGTGCTGCG CCAGGGCCTG 
CGCCGCGAGC ACGTCGGCAG CGTGGTGCTG TTCTGCGCCG TGGCGGACGC CGTGCTCATC 
GCCGCGGGGG TGCTGGGGCT GTCCCAGGCG CTGGGGCGCA GCCCCGGCCT GGCACGTGCG 
CTGGCGCTGG TCGGCGCCGT CTTCCTTGCG GTTTACGGAT GGCAGGCGAT GCAGCGCGCG 
CGGCATGCGC ACCGGCTGAC GGCGGCCGAT GGGGGTGGCG CAGGCGCTGG CGGTCTGGGG 
CGGGGCGCCG CGGTGGCGCA GGCCGCGGCC TTCACGCTGC TCAATCCGCA TGTCTACCTC 
GACACCGTGC TGCTGGTGGG CAGCATCGGC GCGCAGCAAC CGGCGGCGCT GCGCGGCTGG 
TTCATCGCCG GCGCCAGCAG CGCCAGCGTG TTCTGGTTCG TGCTGCTCGG CTTCGGGGCC 
CGGTGGCTGG CTCCCTGGTT TGCCCGGCCG AGGGCCTGGC AGTTGCTGGA CGGCCTGATC 
GGCCTGACCC TGTTCGTGCT GTCGGCGCTG CTGGTGCGGC ACGCCCTGGC TGGACTCTGA
 
Protein sequence
MNLTETTSLA LPVFVQGLAL SFGLIVAIGA QNAFVLRQGL RREHVGSVVL FCAVADAVLI 
AAGVLGLSQA LGRSPGLARA LALVGAVFLA VYGWQAMQRA RHAHRLTAAD GGGAGAGGLG 
RGAAVAQAAA FTLLNPHVYL DTVLLVGSIG AQQPAALRGW FIAGASSASV FWFVLLGFGA 
RWLAPWFARP RAWQLLDGLI GLTLFVLSAL LVRHALAGL