| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4328 |
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| Symbol | |
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| ID | 6164054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4842049 |
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| End bp | 4843107 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641667105 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001793344 |
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| Protein GI | 171060995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.462116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAGCA GCATCCAGGG CCCGGGCATC TTCCTGGCGC AATTCGCGGG CGAGACCGCG
CCGTTCAACA GCCTGCCGGC GATCGGCCGC TGGGCCGCGT CGCTCGGCTA CAAGGGCGTG
CAGATCCCGA GCTGGGACGC GCGCCTGTTC GACCTCGCCC GCGCGGCCGA GAGCCAGACC
TATTGCGACG AGGTGCGCGG CCAGTTGGCA GAGCACGGCC TCGTCATCAC CGAGCTGTCG
ACGCACCTGC AAGGCCAGCT CGTGGCCGTG CACCCGGCCT ACGACCTGCC GATGGACGGC
TTCGCGCCCG AGGCGCTGCG TGGCAAACCG GCCGAGCGCA CGGCCTGGGC GATCGAGCAG
TTGAAGCTCG CAGCCCGCGC CTCGATGCGG CTGGGCCTGA ACGCCCACGC CACCTTCAGC
GGCGCGCTCG CCTGGCCCTA CCTCTACCCG TGGCCGCAGC GCCCGGCCGG GCTGGTGGAA
GCCGCGTTCG ACGAACTCGC CAAACGCTGG ACGCCGATCC TGAACGCCTT CGACGAAGCC
GGTGTCGACG TCTGCTACGA GGTCCATCCC GGCGAGGACC TGTGCGACGG CGCGAGCTTC
GAGATGTTCC TCGACCGCGT GCACCAGCAC CCGCGCGCCA ACCTGCTGTA CGACCCGAGC
CACTTCGTGC TGCAGCAGCT GGATTACCTC GATTACATCG ACCTCTACCA CTCGCGCATC
AAGGCTTTCC ACGTCAAGGA CGCCGAGTTC CGGCCCAATG GCCGCATGGG TGTCTATGGC
GGTTTTCAAG CGTGGAAAGA CCGTGCGGGC CGGTTCCGCT CGCTGGGTGA CGGGCAGGTC
GATTTCCGCG CGATCTTCAG CAAGCTGACG CAACACGGCT ACCGAGGCTG GGCGGTGCTG
GAGTGGGAGT GCTGCATCAA GCACCCCGAA CAAGGCGCAG CCGAAGGCGC GCCGTTCATC
GCCGATCACC TGATCCGCGT GGCTGAACGG GCCTTCGACG ACTTCGCCGC CAGCGGCACC
GACGACGCCG CGAACCGCCG CATGTTGGGC CTCGGCTGA
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| Protein sequence | MNSSIQGPGI FLAQFAGETA PFNSLPAIGR WAASLGYKGV QIPSWDARLF DLARAAESQT
YCDEVRGQLA EHGLVITELS THLQGQLVAV HPAYDLPMDG FAPEALRGKP AERTAWAIEQ
LKLAARASMR LGLNAHATFS GALAWPYLYP WPQRPAGLVE AAFDELAKRW TPILNAFDEA
GVDVCYEVHP GEDLCDGASF EMFLDRVHQH PRANLLYDPS HFVLQQLDYL DYIDLYHSRI
KAFHVKDAEF RPNGRMGVYG GFQAWKDRAG RFRSLGDGQV DFRAIFSKLT QHGYRGWAVL
EWECCIKHPE QGAAEGAPFI ADHLIRVAER AFDDFAASGT DDAANRRMLG LG
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