| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4324 |
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| Symbol | |
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| ID | 6161202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4837927 |
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| End bp | 4839012 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641667101 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001793340 |
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| Protein GI | 171060991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.935984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG TGCAGATCCA GGACCTCGAC ATCCGCCTGG GCGGTGTCGA CATCATCAGC
AAGCTCAACC TCGAGGTCGC CGACGGCGAG TTCCTGGTGC TGCTCGGGCC TTCGGGCTGC
GGCAAGTCGA CGCTGCTGCA CAGCATCGCC GGCCTGATCG ACGTGCACGA CGGCAGCATG
GCGATCGGCG GCAACGACGT CACCTGGGCC GACCCCAAGG ACCGCGGCAT CGGCATGGTG
TTCCAGAGCT ACGCGCTCTA TCCGACCATG ACGGTGGAGC GCAACATGTC GTTCGGCCTG
CGCATCGCCG GGGTCGACAA GGCGCTGATC GAGGCGCGCG TCAAGAAGGC CGCCGAGATG
CTGCACCTGA CCGAGCTGCT GCAGCGCAAG CCCGCCCACC TGTCGGGCGG CCAGCGCCAG
CGGGTGGCGA TCGGCCGTGC GCTGGTGCGC GATGCGGGCG TGTTCCTGTT CGACGAGCCG
CTCTCCAACC TCGACGCCAA GCTGCGCAGC GAGCTGCGCC GCGAGCTCAA GCAATTGCAC
AAGGACATCG GCGCGACGAT GGTCTACGTC ACGCACGACC AGGTCGAGGC GATGACGCTG
GCCAGCCGCA TCGCGGTGAT GAAGGCCGGC AAGATCCAGC AGATCGACAC CCCCGCGGTG
ATCTACGCGC GGCCGAGCAA CATGTTCGTT GCCGGCTTCC TGGGCTCGCC GAGCATGAAC
TTCATCGAAG GCCAGCTCGC GGTGTCGCGT GGCGAGGTGC GTTTCGAAGC CGCCGCGCTG
CCGATCGACG TCTCGCGTTA TGCCTTCGCC AACACGCCGG TGAATGGCCA GCGTGTGGTG
CTGGGCGTGC GGCCCGAGTC GATGCAGCTG GTGGCGCCGA ACGACGAGCG CGCGGTGGCG
CGGGCGCGGG TCTCGCTGGT CGAGCCGATG GGCGCCAATC AGGTGGTGTG GCTCGATGCG
GCCGGCGTGT CGCTGTCGGT CAACCTCGAA GCCACGGCGC TGCCGGTCGA AGGCAGCGAG
ATCGGCCTGG CGGTCGATGC CAGCGGCCTG TCGCTGTTCG ACGCGGACAG CCAGCAGCGG
CTCTGA
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| Protein sequence | MANVQIQDLD IRLGGVDIIS KLNLEVADGE FLVLLGPSGC GKSTLLHSIA GLIDVHDGSM
AIGGNDVTWA DPKDRGIGMV FQSYALYPTM TVERNMSFGL RIAGVDKALI EARVKKAAEM
LHLTELLQRK PAHLSGGQRQ RVAIGRALVR DAGVFLFDEP LSNLDAKLRS ELRRELKQLH
KDIGATMVYV THDQVEAMTL ASRIAVMKAG KIQQIDTPAV IYARPSNMFV AGFLGSPSMN
FIEGQLAVSR GEVRFEAAAL PIDVSRYAFA NTPVNGQRVV LGVRPESMQL VAPNDERAVA
RARVSLVEPM GANQVVWLDA AGVSLSVNLE ATALPVEGSE IGLAVDASGL SLFDADSQQR
L
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