Gene Lcho_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4316 
Symbol 
ID6163099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4828399 
End bp4829163 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID641667093 
Productinositol-phosphate phosphatase 
Protein accessionYP_001793332 
Protein GI171060983 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.866309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC TCGCGTTCTG CCGACAGCTG GCCCAGGAAG CCGGGCGCAT CGCCCACACC 
GGCTTCGGCA CCTCGCCCAC GTCGATGAAG GGCCGCCACG ACGTGCTGAC CGAGATGGAC
CGCGCGGTCG AGCGCCACGT GCGCGCCGCC ATCGCCGCGC GTTACCCCGA CGACGCCGTG
ATCGGCGAGG AAGACGGCGG CGAGCCCGGC GAGCGGGTCT GGATCATCGA CCCGATCGAC
GGCACCGCCA ACTACGCGCG TGGCATCGCG CACTACTGCG TCTCGATCGG CTACCTCGAA
CACGGCGTGC CGACGGTCGG CGCGCTGCAC GACCCGTCGC ACGATCGGCT CTACAGCGCC
GAACGCGGCC AGGGCGCCTG GATGAACGAC GTGCGGCTCG CCGTCAGCCC CTGCGCCGAC
ATCGGCGCGG CCACGGTCGA ATGCGGCTGG TCGGTGCGGC GCAGCACGGC CGACTACCTG
GCGCTGGTCG GCCGCGTCAT GCACGCCGGC TGCGCGATGC GCCGCTCGGG CTCGGGCGCG
CTCGGCCTGG CCGACGTCGC GGCCGGGCGC ATCGAGGCCT ATTGCGAGAT GCACATCAAC
AGCTGGGATT GCGCTGCCGG CATCCTGCTC GTGACCGAGG CCGGTGGCCG CGTGAATGAT
TTTTTTGCCG GTGATGCGAT CACCGCCGGC AATGCCCTGA TCGCCACCAA CCACGCGCTG
GGCGACGAAC TGGCGCGCGT GATCGACATT GCCGAGTTGG CCTGA
 
Protein sequence
MSRLAFCRQL AQEAGRIAHT GFGTSPTSMK GRHDVLTEMD RAVERHVRAA IAARYPDDAV 
IGEEDGGEPG ERVWIIDPID GTANYARGIA HYCVSIGYLE HGVPTVGALH DPSHDRLYSA
ERGQGAWMND VRLAVSPCAD IGAATVECGW SVRRSTADYL ALVGRVMHAG CAMRRSGSGA
LGLADVAAGR IEAYCEMHIN SWDCAAGILL VTEAGGRVND FFAGDAITAG NALIATNHAL
GDELARVIDI AELA