| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4286 |
|---|
| Symbol | |
|---|
| ID | 6161227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 4795843 |
|---|
| End bp | 4797186 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641667063 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_001793302 |
|---|
| Protein GI | 171060953 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2189] Adenine specific DNA methylase Mod |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTCG GACACAACAA GAGCGAACTC GAAGGCGATT CCGCAACTCT CGCGTCTAGG
GTGGGTGATC TCTCGCCCCT GCTACCACTC GCGGGCACAG TAGCGACCAT CGAATATCCC
GGCAAACTGT CACGTGAACG CATTCTGCAA AAGGTCAGCG TTCCATTCGT TTCTGTTGAC
CCTGCCGGAA CTGTCCGCGA TGACTCGGTG AGAGCGAACT CCTTAGTCTG GTCAGACAAT
TGGTTTGCAC TTCACAACTT ACTCGCATCG GGGAAGAAGG CGACACTAAT TTATCTGGAC
CCCCCATACG CGACAGGGCT CGATTTTCAA TCGAGGGACC AAGAACACGC GTACAACGAT
GCACTTTCAG ATGCGGGATA CATTGAATTC ATTCGACGAC GCTTGATACT GATGTTGGAA
TTGCTTTCAG ACCAGGGGTC GATCTACGTT CACATCGGGC ATCAAATGTT GGGCGAAATG
AAACTCATTT TGGATGAGGT GTTCGGCGCC AAGAATTTTC GCAACATAAT CACCCGGCGC
AAATGCAGCA GCAAGAACTT TACAAAACAT CAATACGCAA ATCTTAACGA CTACATTCTC
TTCTACAGCA AGAGCGACAG CTACACGTGG AATCAGCCCA TGGAGAATCC CGACCCAGAT
TGGATTGCAA AAGAATATCC AAAGGTCGAC TCTAAGGGGC AATACAAACT CGTGCCCGTC
CATGCCCCCG GCACCAGGCG CGGAGAGACT GGTGGCCTTT GGCGAGGAGA AATGCCGCCC
GCAGGCAAGC ATTGGCAATA CACACCCACA CGACTAGATG AATTCGACGC CAAGGGTGAA
ATTCATTGGT CAAAAAATGG GAATCCCAGG CGCAAGGTTT ATCTGCCAGC AGACAAAGGC
CTAGCGCTGA CAGATTACTG GGACAAGTAT CGGGATGCGC ATCATCAGAG CATTCTCATC
ACGGGGTACC CTACCGAGAA AAACTTCGAG ATGATGAAAA TGATTGTTGC AGCTAGCAGC
AACCCGGGAG ACCTTGTGAT TGACCCGTTC TCTGGATCGG GCTCTACTGT CCATGCTGCT
GATGTGCTCG GTCGAGAATG GATCGGGATC GATCAGTCAC TGCTTGCGGT CAAGACTGCG
ATCAAACGCC TTACGCTCGG CCGAAATCCG ATGGGGGATT TCGTGAAGGG GGAAACACCG
CCAGATCTGT TTTCCGAATT TAAAGCTTCG ACTGTTCAAC ATGAAACTGT AAGTGCCGAA
TTCAGTCTAC TAGTCGATCA CGAGATCTCG AAGTTGCACC CCGCGGAAGT TTCTGGCCTT
GCTGGCCTAC TCCCCAAACC TTAA
|
|---|
| Protein sequence | MAVGHNKSEL EGDSATLASR VGDLSPLLPL AGTVATIEYP GKLSRERILQ KVSVPFVSVD
PAGTVRDDSV RANSLVWSDN WFALHNLLAS GKKATLIYLD PPYATGLDFQ SRDQEHAYND
ALSDAGYIEF IRRRLILMLE LLSDQGSIYV HIGHQMLGEM KLILDEVFGA KNFRNIITRR
KCSSKNFTKH QYANLNDYIL FYSKSDSYTW NQPMENPDPD WIAKEYPKVD SKGQYKLVPV
HAPGTRRGET GGLWRGEMPP AGKHWQYTPT RLDEFDAKGE IHWSKNGNPR RKVYLPADKG
LALTDYWDKY RDAHHQSILI TGYPTEKNFE MMKMIVAASS NPGDLVIDPF SGSGSTVHAA
DVLGREWIGI DQSLLAVKTA IKRLTLGRNP MGDFVKGETP PDLFSEFKAS TVQHETVSAE
FSLLVDHEIS KLHPAEVSGL AGLLPKP
|
|---|
| |