| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4216 |
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| Symbol | |
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| ID | 6163808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4727184 |
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| End bp | 4727600 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666993 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001793232 |
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| Protein GI | 171060883 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0662] Mannose-6-phosphate isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.014913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGACA CGCTGTTTTC CCACGTCAAG CCGATGGACA CGGTGTTCCG CGGCGACGGC
CTGCGCGATT TCTTTCTCTA CCGCGACCTC GGCATCAGCG AGGCCACCGG CGGCAAGGTG
ATCGCACAAC TCGTGGTGGC GCACAACGCA CCCGAGAAGG GCACCGGCTG GCACCGCCAT
GAAGCGGAGT TCCACATCGT CATCATGCTG CGCGGCTGGG CCCGGTTCAT GTACGAGGAC
CAGGAGACGC TCGTCAGCGC CGGCGACTGC GTGCACCAGC GCCCGGGCGT GCGGCACTTC
CTGTTCGACT ACTCGCCCGA CATGGAATAC CTCGAGATCG TCGGCCCGGC CGACTTCAAG
ACCATCGATG TCGAGCCGGT CTGCCCGATC CCGGCGCCCA GGGGCTGGGC GATCTGA
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| Protein sequence | MLDTLFSHVK PMDTVFRGDG LRDFFLYRDL GISEATGGKV IAQLVVAHNA PEKGTGWHRH
EAEFHIVIML RGWARFMYED QETLVSAGDC VHQRPGVRHF LFDYSPDMEY LEIVGPADFK
TIDVEPVCPI PAPRGWAI
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