Gene Lcho_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4187 
Symbol 
ID6162126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4693870 
End bp4694427 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content72% 
IMG OID641666964 
Producthypothetical protein 
Protein accessionYP_001793203 
Protein GI171060854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.431269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA CTGTCGGTTG GGCCGTGCTG GCCGCTTCGG CCCTGTGGCC TGTCGCCCAG 
GCGCAGACCC ACAAGGTGCA GCCCGGCCTG TGGGAGAACC AGGTCACGAT CCAGACCGGC 
GACCCGGTGC TCGACCAGAT GGCCGCCGAC ATGCAGGCGC GTCTGGCCGG CCTGCCGCCG 
GAGCAGCGCC AGATGGTCGA GCAGATGATG GCCGCGCGCG GCGTGCGCAT GGGCGCCAGG 
CCGAACACGC TGCAGGCCTG CATCACGCCC GAGCAGGCCG CGCGCGACGA GCTGCCGCAG 
CAGAGCGAGC AGTGCCAGCA GCTGGAGGCC CAGCGCGACG GCAACACCAT CAAGGTCAAG 
TTCACCTGCG AGACCAGCCC GCCGGCCAAG GGCGAGGGCG AGTTCACGCT CATCAGCCCC 
ACCCGCTACA GCGGCCGGAC GCGTGTGGAC ACCGTGGTGC AGGGCCAGCC GGCGCAGGTC 
AACATCCTGC TCAGCGGCCG CTGGATGGGC GCCGACTGCA AGGCCGCGCC GCCGGCGCGA 
CCGGGCCGGG CGCCCTGA
 
Protein sequence
MKFTVGWAVL AASALWPVAQ AQTHKVQPGL WENQVTIQTG DPVLDQMAAD MQARLAGLPP 
EQRQMVEQMM AARGVRMGAR PNTLQACITP EQAARDELPQ QSEQCQQLEA QRDGNTIKVK 
FTCETSPPAK GEGEFTLISP TRYSGRTRVD TVVQGQPAQV NILLSGRWMG ADCKAAPPAR 
PGRAP