| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4165 |
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| Symbol | |
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| ID | 6162702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4666101 |
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| End bp | 4666820 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666942 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001793181 |
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| Protein GI | 171060832 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAC CCACGCCCCG CCCGAACGCC GTTGCCCAGC CGGCCGCCGT GCTGTTCGAC
GCTTACGGCA CGCTGTTCGA CGTCTACAGC GTCGGCCTGC TGGCCGAGCA GCTGTTCCCG
CAGCGTGGCG AGGCGCTGTC GCTGCTGTGG CGCGACAAGC AGATCGAATA CACCCGGCTC
GTGACCATGA GCGCGGCCGA CGGCAGCCGC TACCGGCCGT TCTGGGAGAT CACCCGCGCC
GCGCTGCGCT TTGCCTGCCA GCGGCTCGGC CTGACCTTGA CCGACGCAGC CGAAGAGCGG
CTGATGAACC AGTACCGCAG CCTGAGCGCC TTCCCGGACG TGCGCGAGGT GCTGCAGGCG
CTCAAGGCGC GTGGCGTGCC GACCGGCATC CTGAGCAACG GCGACCCGGC GATGCTGGGC
ATCGCGGTGC GCAGCGCGGG GCTGGAGAGC CTGCTGGATC ACGTCATCAG CGTCGAGCCG
GTGCGCGCCT TCAAGACCGA TGCACGCGCC TACGCGCTGG GCCCGCAGAC GCTCGGCCTG
GCTGCCCGCC AGATCCTGTT CGTCTCCAGC AACGGCTGGG ACGCCATCGG CGCCACCTGG
TACGGCTACA CCACGCTGTG GGTCAACCGC GCCGGCCTGC CGCTGGAACA GCTCGACACC
GAGCCCGGCC GCATCGGCAG CAGCCTGCAC GACGTGCTGG GTTTCTTCCC GGCGCGCTGA
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| Protein sequence | MDKPTPRPNA VAQPAAVLFD AYGTLFDVYS VGLLAEQLFP QRGEALSLLW RDKQIEYTRL
VTMSAADGSR YRPFWEITRA ALRFACQRLG LTLTDAAEER LMNQYRSLSA FPDVREVLQA
LKARGVPTGI LSNGDPAMLG IAVRSAGLES LLDHVISVEP VRAFKTDARA YALGPQTLGL
AARQILFVSS NGWDAIGATW YGYTTLWVNR AGLPLEQLDT EPGRIGSSLH DVLGFFPAR
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