| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4125 |
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| Symbol | |
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| ID | 6161607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4632928 |
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| End bp | 4633947 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666903 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001793142 |
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| Protein GI | 171060793 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.622365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCC TCTCGATTCG ACAGGCGTTG GCGCGCGCAG CGCTGCGGGC GTTTTCGCTG
GCGGCGGCCC TGGGCGCCGG CGTGCTGCTG GCCGGCTGCG GCGGCATGCC GATGACGCAG
GCCGAGGCGA CGGCGACAGC CCGCGACGTG CCGGCTGGTG CGGTGGCGCT GGGCCCCTTT
CGCACCGTGG CGGGTGGTTT CCTGGCCGCG CCGGGCGCCG TGTTCGGCAT GCCGACTCGC
CCGGGCAGCG GCGCCTACGT CAAGCTGCTG GCGCCTGCTG CGGTGGCGCT GCGTGGCAAC
GATCTGCTGG TGGCCGACAG CGGCAGCGGG CGGGTCTGGC GGGTCGACAT CGCGCTCAAC
ACCTTCAGCC CGATCGCCGG CGTGACCGCC ACGCTCGGCA GCGCGGTGGC GCTGGGGCCG
GACCTGTCGG CCTGGGTGCT CGACGGTCTG TCGCGCCAGG TGCAGCGTTT CAGCCGTGAC
GCCCGCCTGC TGCAGAGCTA CCGCACCGAC AACGCCGCCA CCTCGACGGC CGCCTTCACG
CTCGCCGACG GCGGCGGCAC GCTGCTGCTG GCCGACGACA GCCAGCGCCA GTGGCTCGAA
CTGCGCCCGG CCGGCGCGCG TGCCACGCCG GTGCGGCCCG GGGGCACCGA GCCGCTCGAC
GTGCGCGGGG TCGACGCCCT GGCCAGCGCC GGTGACAGCG TCTACGTGCT CGACCGCAAC
GCCGCCGTGG TGCACGTGGT GCGGCGTGAC GGCCAGGTCA CGGGCAAGCT CGGCGCCGGC
GAGCTCAAGC AGCCGGTGGC GATCGCGGCC GATCGGCGCG GGCGTGTCTT CGTGGTCGAT
GCGCAGGACC GCGCCATCAA GCTGCTGCGC CCGGGCCGGC CGGCGCAGGT GTTTGACGCC
GCGCAACTGC GGGTGCAGAT GATCGGCGGC ATCGCCATCG ACGAGCAGTT CCTGGTCGTC
ACCGACCGCC TGACCGGCCA GGTGGTGATC CACAGCCTGC GCGAAGGGCC GGCGCCGTGA
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| Protein sequence | MRFLSIRQAL ARAALRAFSL AAALGAGVLL AGCGGMPMTQ AEATATARDV PAGAVALGPF
RTVAGGFLAA PGAVFGMPTR PGSGAYVKLL APAAVALRGN DLLVADSGSG RVWRVDIALN
TFSPIAGVTA TLGSAVALGP DLSAWVLDGL SRQVQRFSRD ARLLQSYRTD NAATSTAAFT
LADGGGTLLL ADDSQRQWLE LRPAGARATP VRPGGTEPLD VRGVDALASA GDSVYVLDRN
AAVVHVVRRD GQVTGKLGAG ELKQPVAIAA DRRGRVFVVD AQDRAIKLLR PGRPAQVFDA
AQLRVQMIGG IAIDEQFLVV TDRLTGQVVI HSLREGPAP
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